| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5678 |
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| Symbol | |
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| ID | 6182088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 187938 |
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| End bp | 189164 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641688810 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001815674 |
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| Protein GI | 172064962 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000120872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0293014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGACC ACGCCACCAA CGAATTGCTG ACCCGCGTGG GGCCCGGCAC GCCGTGCGGC
GAGTTGCTGC GTCGCTACTG GCATCCGGTC GGTTATTCGT CGGAGCTGGC CGAAGCCGGC
CAGACGAAAC GCGTGCGGAT TCTCGGCGAG GATCTGGTGC TCGCGCGCAC CGGTAACGGC
GGCGTGCTGC TCGTGCAGGA GCGTTGCCCG CATCGCGGTG CATCGCTGCT GTACGGCTTC
GTCGAGGAAG CCACGATCCG CTGCGCGTAT CACGGCTGGC AGTACAACGC GGCCGGCGAA
TGCGTGGAGC GGCCGTTCGA ATCGGCGAAG GCGAGCCGCG TCTGCAAGAA GCTGATCGAC
AGCTATGCGA CGCACGAATG CGGCGGGCTG ATCTTCGCAT ACATGGGGCC GGCGGAGCAG
AAGCCCGCGT TTCCGAACTG GGACATCCTC GTGCGCAACG ACGGCGTCCG CCATTTCGAG
GTGCAGGACG ATCTCGCGTG CAACTGGTTC CAGGTGCAGG AAAACGCTGT CGACGTCACG
CACACCTTCT ATACGCACTC GAAATACTTC GAGCACCTCG GCATGCGCGA CGCGTCCGGG
TTCGGCAAGC CGTTCAAGCG GTTCGGCTTC CAGCGCTTCG ACTGGGGCAT CGTGAAGAGC
TGGGAATACG AAGGCGAGGG CCGTGGCTGG GGCAACCTGA TGGTGTTCCC GAACATGCTG
CGGATCATGA CCGAGATGCA CTGGCGCGTG CCGGTCGACG ATACGACGAC GCGGATCGTC
TGGGTGTCGT TCACGCCGAA CGCGGACGGC GCGCAGCCGC CCGCGGACGA GGCGCCGAAG
ATCGTCCGGC AGCCGGCGCG CACCGACTCG GCGGGCCGCT ACCTGATGGA CACGTTCATG
AGCCAGGATG CGATGGCGGT CGAGACGCAG GGCCCGATCT TCGATCGTTC GCGCGAGAAC
CTCGGCGCGT CCGATCGCGG GATCGTGATG TTCCGCCAGA TGCTGCAGGA GCAGATCGAC
GCGGTCGCGC GCGGCGAGCG GCCGGTCGCG AACGTGTACG GCGGCGCGCC GGACGTGACC
GACCTGCGCG CATGGATGGG CGGCTATCTG CCGATGAGCT GCGCGCCGGA CCCGACGTTC
CGCCAGCAGC GCGAATTCGG CGACATCTTC GACGAGTCGC ACGTCGAATA CGAGATCCCG
GCGAACTCGC CGGTGATGCG CGCTTGA
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| Protein sequence | MLDHATNELL TRVGPGTPCG ELLRRYWHPV GYSSELAEAG QTKRVRILGE DLVLARTGNG
GVLLVQERCP HRGASLLYGF VEEATIRCAY HGWQYNAAGE CVERPFESAK ASRVCKKLID
SYATHECGGL IFAYMGPAEQ KPAFPNWDIL VRNDGVRHFE VQDDLACNWF QVQENAVDVT
HTFYTHSKYF EHLGMRDASG FGKPFKRFGF QRFDWGIVKS WEYEGEGRGW GNLMVFPNML
RIMTEMHWRV PVDDTTTRIV WVSFTPNADG AQPPADEAPK IVRQPARTDS AGRYLMDTFM
SQDAMAVETQ GPIFDRSREN LGASDRGIVM FRQMLQEQID AVARGERPVA NVYGGAPDVT
DLRAWMGGYL PMSCAPDPTF RQQREFGDIF DESHVEYEIP ANSPVMRA
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