| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5677 |
|---|
| Symbol | |
|---|
| ID | 6182087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 186544 |
|---|
| End bp | 187941 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641688809 |
|---|
| Product | sodium/sulphate symporter |
|---|
| Protein accession | YP_001815673 |
|---|
| Protein GI | 172064961 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0471] Di- and tricarboxylate transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0143035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0333919 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGGCA GTGCGCTCGG CGGGCCGGGC CGCGGCGCCG GCATGCTGAC GGGCGGCCGC
GTCACGGCCG TGCTGCTCGC GGCGGGGCTC GCGAGCGTCG CCGCGCTCGG CGCGCGCGGC
ACGCTGTCGG CCGGCGACGC TCGCATCGTC GCGATTGTGT TCACCTGCAT CGTGCTGTGG
GCGACGGGCG CGGTCGCGAG CCTGTGGGTG TCGCTGCTGT TTTTCTTCCT CGCGGCGACC
TGCACGGCGG TGCCCACCGC CGAGATCTTC TCCGGCTTCG GGTCGAGCGC GTTCTGGCTC
GTGTTCAGCG GCGCGGCGAT CGGCTTCGCG CTGAAGGAGA GCGGCCTGAG CGAACGGATC
GGCATCGCGC TCGCGCGCCG GATCGGCGGC TCGTATCTGA AGGCGCTGCT CGCATTCGCG
ATCCTGAGCT TCCTGCTGTC GCTCGTGATG CCGTCGACGT TCGGGCGGAT CGCGATCCTG
GTTCCGATCG CGATCGGCTA CTGCGACGTC GTGAAGCTCG GCGCGCACGC GAACGGGCGG
CGCGGCATCC TGCTGCTCGT GATCGTCGGC TCGTACGAAC TGGCTGCCGC GGTGCTGCCC
GCGAACCTGC CGAACGTGAT CATGGCGGGG ATTCTCGAGC AGTCGCACGG GATGCATCTG
CGCTTCTCCG AGTATCTGCT GCTGTTCTTT CCGGCCGGCG TGATCGTGCG CGGCGCGGTG
CTGGTGCTCG CGTCCTGGTG GCTGTTCGCG GATACGGTCG GCGAAGTCGA GATACCGGCG
GCGCGCGTCG CGCTCGGCCG CCGCGAATGG CACGCGATCG TGCTGCTGGC GATCACGCTC
GCGTTCTGGT TCACCGACGC CGTGCATCGC ATCGCGCCCG GCTGGGTCGG GCTCGGCTTC
GCGCTCGTCT ACTTCGGCAC GTCGCCGCCC GCGCGGCTCG AGCGCTTCAC CGCGACGCTG
AAGATGGACC TGCTGTGGTT CATCGCGGCG ATCATCGGGC TGACCGCGCT CGTCAACCAT
CTCGACATGC GCGTTCCGGA CACGCTCGCG CTCGACGCGC TGCGCGACAG CCCGATGCTC
GTGTACTTCG CGCTGACCGC GCTGTCGATC GTCGTCTGCT TCGCGGTCAC GTCGAATGCG
GAACCGGCGC TATACGTGCC GATCGTGTCG CGCCTGCTCG CGCAGGGGCT GCACCTGAAG
GCCGGCCTGC TCGCGCAGGT GATGGGCTAT GCGACCACGG TCCTGCCGTA CCAGTCGCCG
CCGATCGTGT TCGGCAACGC GCTCGCGCAG CTGGACCGGG GTGCGGTGCT CCGGTACTGC
ATCGCGACGG CGCTGCTGGG CGTGGTGTTC GTGATCCCGG TCAATGCGTT GTGGTGGCGG
CTGATCGGGC TGATGTGA
|
|---|
| Protein sequence | MSGSALGGPG RGAGMLTGGR VTAVLLAAGL ASVAALGARG TLSAGDARIV AIVFTCIVLW
ATGAVASLWV SLLFFFLAAT CTAVPTAEIF SGFGSSAFWL VFSGAAIGFA LKESGLSERI
GIALARRIGG SYLKALLAFA ILSFLLSLVM PSTFGRIAIL VPIAIGYCDV VKLGAHANGR
RGILLLVIVG SYELAAAVLP ANLPNVIMAG ILEQSHGMHL RFSEYLLLFF PAGVIVRGAV
LVLASWWLFA DTVGEVEIPA ARVALGRREW HAIVLLAITL AFWFTDAVHR IAPGWVGLGF
ALVYFGTSPP ARLERFTATL KMDLLWFIAA IIGLTALVNH LDMRVPDTLA LDALRDSPML
VYFALTALSI VVCFAVTSNA EPALYVPIVS RLLAQGLHLK AGLLAQVMGY ATTVLPYQSP
PIVFGNALAQ LDRGAVLRYC IATALLGVVF VIPVNALWWR LIGLM
|
|---|
| |