| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5666 |
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| Symbol | |
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| ID | 6182121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 173810 |
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| End bp | 174277 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641688798 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001815662 |
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| Protein GI | 172064950 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.326026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0069947 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGCGAC TATTCACGCC CAAGCCGGCG CTCGCGCTGG CGCTTGCCGT TCTGTCCGCG
CGGCCCGCCG AAGTGCGCGC GCAGACCCCC GACTGCTTTG CGGCGGCCGC AGCCTATCAA
CATGTGAGCC CCGTCGTGCT GCGCGCGATC GCGTGGCAAG AATCGCATGG CAACGCGAAC
GCGCTCCATC GCAATCGGAA CGGTTCGACC GATTACGGCA TGATGCAGAT CAACTCTATT
CACCTTCCGC TGCTGTCGCG CTACGGCGTC TCGGCTGACG ACCTCATGAA CCCTTGCTTG
AGCGTGTACG TGGCTGCGTG GCACCTGCAC AAGATGATGG TCAAGTACGG GAACAACTGG
GCGGCGATCG GTGCCTACCA TTCGGAGACA CCTGCCGAGC GCGACCGCTA CGCGCGTTCG
GTGCAAAGCA TCGTCGAGCG CATGAAGCTG GCGGACGACG GGCAGTAG
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| Protein sequence | MMRLFTPKPA LALALAVLSA RPAEVRAQTP DCFAAAAAYQ HVSPVVLRAI AWQESHGNAN
ALHRNRNGST DYGMMQINSI HLPLLSRYGV SADDLMNPCL SVYVAAWHLH KMMVKYGNNW
AAIGAYHSET PAERDRYARS VQSIVERMKL ADDGQ
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