| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5665 |
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| Symbol | |
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| ID | 6182120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 172202 |
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| End bp | 173635 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641688797 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001815661 |
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| Protein GI | 172064949 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.152948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00312534 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCTCGA CGATCTACTT CGCCGCGGCC TCGGCCCTCG CTTTCGACGA CACCCCTGCG
GACGTCGCCT CGAAAATGCT CCAAGGCCAG TTTCTCGACG CTGTCCGCCA CGCCGCACGC
CATGCCGATA CCGACACGGC GCAAGCTCAG CCCGGCTACG CACAACTGCA AGTCTGCGCC
GACCTCGAGC TGATGCTCGG CCGCCATGAA GAAGCGGAGG AAACGTATCG CCGCGCGCAA
AAAGCCATTC GCGCCCAACG CGACGGTCTG CGTATCGCGT CGTGCCGCAA TACCGGCTGG
CAAGCCTTCT TCCGCAACCA GTTCAACGTC GCGCTCAGTT GCTTCAAGCG CGTCGGCGAG
GAAAAGGCGG CCACGCCGCA CCAACGTCTC GACAGCCTCG TCGGTGCGAC ACTCGTTTCG
TTTCATCTGG GCTTGATCCA GGCGGCGTGC CATCGCCTCG GCGAGCTGGC CGCGCTGGCG
GCAACGCATG GCGATCGCCG CTGGAGCTAC CTCGTGGAGG CGCTGCGGCG GGACCTCTTC
GCGCAGCACG AACTGCACGG TGCCGAGCGA CTCGCCGACC ACATCTACTG GCGCTCGGCT
ATCGGGGAGT TCGAGCCGAG CGAGGCGCCG GTACCCGGCT CGCAGCCCGC CGGGACCGTG
CTGCCGCTGC TGGCCGAACG ACTCTCGCAC CTGAACCGGC TCGTTTCGCT GGCCGACGGC
CGGACGAGCG CGGGCGAAAC GCTCAAGCAA TACGTGAGCT GGAGCCGCCA GGCCGGCCTC
AACGATTATC ACCGCAGCCT GTGCCTCGAA ATCACGTTGG CCGCGATCGC CGGCCACGCG
ACGCCGTTGG CCGAAGCGAT GCTCGATGCG TCCGGCGCGG CGAATTCGCA AGGCAGCCAG
CATGCGCGCT GGTACCTCGA CTACCTCTAC TGCCGCGCGA AGATCATGCA GCAGCAGATG
CGCACGCAGG AATTCGCACA GTTCTACGGC CGCTACGCGC TCGCCTCGAT TCAGCACGTG
CGCGCGGACA TGTCGATGCC CGCCGCCGCG GCCGATCACA TGCAGGCATC GCGCACGGCG
CAGCGCTCCG ACGACGTGAG CGCCCGCCTG CCGGCGAAAT ACCGCCGCGC CTATCGCTAC
CTGATGGACA ACCTCGACCA AAAGGACCTT TCGGTGCGCG AAGTGGCATC GCATGTGGGC
GTGACCGAGC GCGCGATGCA GGCAGCGTTC AAGAACCACC TCGGGCTGTC GCCGAGCGAG
CTGATCCGGC GCCAGCGGAT GGAGCGCATT CGCGACGATC TGCTCGACGA CGGCGCACCG
GCCACGCGCG TGCTCGACGT CGCGAACAAG TGGGGGGTGC GCCATCGTTC GACGCTGATC
AACGGCTACC GGCGCGTGTT CCAGGAAGCG CCCTCGGAGA CGATGGGCCG CTGA
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| Protein sequence | MFSTIYFAAA SALAFDDTPA DVASKMLQGQ FLDAVRHAAR HADTDTAQAQ PGYAQLQVCA
DLELMLGRHE EAEETYRRAQ KAIRAQRDGL RIASCRNTGW QAFFRNQFNV ALSCFKRVGE
EKAATPHQRL DSLVGATLVS FHLGLIQAAC HRLGELAALA ATHGDRRWSY LVEALRRDLF
AQHELHGAER LADHIYWRSA IGEFEPSEAP VPGSQPAGTV LPLLAERLSH LNRLVSLADG
RTSAGETLKQ YVSWSRQAGL NDYHRSLCLE ITLAAIAGHA TPLAEAMLDA SGAANSQGSQ
HARWYLDYLY CRAKIMQQQM RTQEFAQFYG RYALASIQHV RADMSMPAAA ADHMQASRTA
QRSDDVSARL PAKYRRAYRY LMDNLDQKDL SVREVASHVG VTERAMQAAF KNHLGLSPSE
LIRRQRMERI RDDLLDDGAP ATRVLDVANK WGVRHRSTLI NGYRRVFQEA PSETMGR
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