| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5659 |
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| Symbol | |
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| ID | 6182114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 163732 |
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| End bp | 164808 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641688791 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001815655 |
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| Protein GI | 172064943 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.867335 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00476713 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACTTG AGCTCAACCG GCGCTGGGCG CGCCTGCAAT TCACGACGCA GGCGCGCCTG
CGGCTCTATC GCAAGATCGC GAAGATGCTC GCGAACGGTT TGCCGTTGCT CAAGATTCTC
GAGGAGCTCG AGTTGCGTGC GTCGCACGAG GGCCGCAAGC CGAACGAGCC GCTGGCATTG
ACGCTCGCGG ACTGGCGCAG CGTCGTGCAA AACGGCGGCA TGCTGGCCGA GGCGATGGCG
TGGTGGGTGC CGCATACCGA GCAGATGATC GTCATGGCCG GCGAGCAGTC GGGACGCCTC
GAGGCCGCGC TGCTGAACGT GTGCACCGTC GTGCAGTACA GCCGCCGGAT CCGAACGGCC
ATCGTCGGCG GGTTGACCTA CCCGTGCGTG ATCGTGGCGA TGACGATCGG GTACGTGTAC
CTCTTCGGCA AGCTCGTGAT TCCGCGCTTC GCGTCGATCG TGAGCCCGGA GCGCTGGCAC
GGCGTGGCGA AGTCGCTCTA CGAGCTGTCC CGGTTCGTGC AGGGCGGCAT GATCTACTGC
CTCGTGGTGC TCGCGATCCT CGTCGCGGCG CTCTTTTACT CGATGCCGCG CTGGTCCGGC
AACGTGCGGG TCTGGCTCGA CCGCTACCCG CCTTACTCGA TCTATCGGCT CATTACGGGC
TGCGGTTTTC TCGTCGCGTT TTCGTCGCTG CAGGCGGCCG GCTTCACGGT CGAACGCTCG
CTCGCGCGGC TGGCCACCGA TGCGAAGCCG TGGCTCAGGC AGCGAATCGA CGACATGCTC
TTCGGCGTGA AGTCGGGGCT CAACGTCGGC GAGGCGATGA AGAACGCCGG CTACCGGTTT
CCTTCGGAGG AGATCGTCGA CGATCTGTGT GTGTATGCCG AATACAAGGG CTTCGCCGAG
GCGCTGCACG CGATCGCCAG CGAATGGATG ACCGACGGCG TGGAGACGAT CGAGGCGCAG
ATGCGCGTGG TCAACGGCGC GGCGATCGTC GTGCTCGCGC TCGTGCTGTC GTGGCTCATC
AGCGGCTTCT TCGGAATTCA GCAGGAAATT GCGGCTTTGG CCCGGAGTCT GCATTGA
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| Protein sequence | MALELNRRWA RLQFTTQARL RLYRKIAKML ANGLPLLKIL EELELRASHE GRKPNEPLAL
TLADWRSVVQ NGGMLAEAMA WWVPHTEQMI VMAGEQSGRL EAALLNVCTV VQYSRRIRTA
IVGGLTYPCV IVAMTIGYVY LFGKLVIPRF ASIVSPERWH GVAKSLYELS RFVQGGMIYC
LVVLAILVAA LFYSMPRWSG NVRVWLDRYP PYSIYRLITG CGFLVAFSSL QAAGFTVERS
LARLATDAKP WLRQRIDDML FGVKSGLNVG EAMKNAGYRF PSEEIVDDLC VYAEYKGFAE
ALHAIASEWM TDGVETIEAQ MRVVNGAAIV VLALVLSWLI SGFFGIQQEI AALARSLH
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