Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5657 |
Symbol | |
ID | 6182112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 162531 |
End bp | 163010 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641688789 |
Product | PilM; PilM |
Protein accession | YP_001815653 |
Protein GI | 172064941 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00696203 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCCTGA TCTGGATCGT CGCCGCCTTC GCGATGCTTA CCGGTGCCTA CGCGCTGCTC GGCGCCGAGG CGGCGCCGGC ACCGCTCGCG CCGTCGGCGA TGGCGCTCGC GGCGAACATG AGCGCCTACC GGCAGGCCGT GGTGGCTTTC GCGCGCGCCA ACCCGTCGTT CGCTGGCAGC GTGCCGGCGG CGAGCCTCGC GCCCTACCTC GGGGCGACCG TTCCCAATCC GGTGTGGCGG AACTACGTCC AGCCCAATAC CGGCTATGCG GGCAGCCTGG TCGTGGTCTA TGCGGCGTCG GCGTCGGCCG CGGCCGCGGT CGACGGCATC GAGCAGATTG CGCAGGGCTC GGCGCTGGCC GGCGTGGCGC TCGGCGCCAA CCTCGTGTCC CCCGGCAACC CGGCCGTGCC GCTGCCGGCC GCATTGGCGA ACACGATCCC GAACGGCATG CCGGTATGGA TGGCGCAAGC GTATGACTGA
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Protein sequence | MFLIWIVAAF AMLTGAYALL GAEAAPAPLA PSAMALAANM SAYRQAVVAF ARANPSFAGS VPAASLAPYL GATVPNPVWR NYVQPNTGYA GSLVVVYAAS ASAAAAVDGI EQIAQGSALA GVALGANLVS PGNPAVPLPA ALANTIPNGM PVWMAQAYD
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