| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5651 |
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| Symbol | |
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| ID | 6182466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 154193 |
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| End bp | 155533 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641688783 |
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| Product | NolW domain-containing protein |
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| Protein accession | YP_001815647 |
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| Protein GI | 172064935 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02516] type III secretion outer membrane pore, YscC/HrcC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0288442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTGGG CCGGCGGCCC CGGCGCCCGC TTCGTCTACG TGACGAACGG CGCGGGCCTC
GCGGAGGTCC TGAATGCCTT CGCAGCGGGG CAGCACGTTG CCCTGCGCAT CGACGGTCAA
GTGGAGGGTG TCGTGAGCGG CCGTTTCGCC ATGCCGCCGC AGCGCTTTCT CGATGTCATG
AGCCGTTCGT ACGGATTCGT CTGGTACTAC GACGGTGCGG TGCTGCATGT GTCGCCCGCG
AACGAGCAGG CGCATGTCAC CATCCGGCCT CACTTCCTTG CTGCGAATGC GCTGCGTGCG
TCGCTCGAGC AGGCAGGTCT TGCCGATACG CACTTCCCGT TGGCGGTGGA TGCCGCCGCG
CAAACGGTGA ACGTGCGCGG GCCAGCGACC TACGTGGAGC GTATTCGTGC CGCGGCCGAG
CGCTTCGAGC GCGACGCGCA AAAGCGCGTG CGTTTGTCCG TGCGGGTGTT TCGCCTGAGT
GCCGCGAATG CCGCGGACGA AACGCGCGTA GTCGATGGCC GCACGCTCGT CGTGCCCGGT
GTGGCCACGC TCTTGCGGCG CCGTTTCGAG CGCCCGGCCG TGGCGAGCGG GACCGCCGTT
TCCGATGCAC CGCGGATCGT CGAGTTCGAT GCGGCGTTGC CGGCGATCGA AGCGGATGCG
ACCACGAATT CCATCCTGAT ACGCGATCGG GCCGAGCGCA TCGACGCCGA CGGCGCGCTC
GTCGCCAGCC TGGACGTGCG TGCGCAGCTC GTATCGGTCC AAACGTGGGT GGTGGATGTC
GATGGCGACG CGCTCGACGC GTTGCAGCCC GCGCTGCCGC CGGCCATGGC CGACGGGGCA
GGCGCGGCGC AGGCGACGGC GGACGCGCGC GAGCACCGCG ATGCAGGTAT CGCGCCCGAC
GGCGGCCGCG CGCTGCTCGC GCAGCTCAAG GCATTGGCCA GGAGCGGCCG CGCCGAAATC
CAGGTGTCGC AAACGGCGCT GACGCACGAT CGCTCGCCGG CCGTCATCGA CCGCCACGAG
GCACGTCTCG CACGCCGCGA CGAGGATGAC CTGCCCGATG ACGGCGCCCG CGATCTCTGG
CTCTCGATTG CACCGACGGT CGAAGGCGCC GCGTCGATGC CGCGTATCGG CTTGCGCGTG
GAACTGGGGC GCCGCCACGA TGCGCGCGGC TATCGGGCCG TCGACGAAAG CCTGGCGCCG
GGCGAGTGCC TCGTCATCGA GGGACCGGCG CGGCACAGGG GCGATGTCGA GCGTCGCGCG
GACGATACCG ATTCCGGCGG TGCGGGAGAG GGGGGCATGC GCCGCCGCCT CGTCTTGCTG
ATACCGCGCG TGGCAGCATA G
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| Protein sequence | MEWAGGPGAR FVYVTNGAGL AEVLNAFAAG QHVALRIDGQ VEGVVSGRFA MPPQRFLDVM
SRSYGFVWYY DGAVLHVSPA NEQAHVTIRP HFLAANALRA SLEQAGLADT HFPLAVDAAA
QTVNVRGPAT YVERIRAAAE RFERDAQKRV RLSVRVFRLS AANAADETRV VDGRTLVVPG
VATLLRRRFE RPAVASGTAV SDAPRIVEFD AALPAIEADA TTNSILIRDR AERIDADGAL
VASLDVRAQL VSVQTWVVDV DGDALDALQP ALPPAMADGA GAAQATADAR EHRDAGIAPD
GGRALLAQLK ALARSGRAEI QVSQTALTHD RSPAVIDRHE ARLARRDEDD LPDDGARDLW
LSIAPTVEGA ASMPRIGLRV ELGRRHDARG YRAVDESLAP GECLVIEGPA RHRGDVERRA
DDTDSGGAGE GGMRRRLVLL IPRVAA
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