| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5634 |
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| Symbol | |
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| ID | 6182449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 138527 |
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| End bp | 139918 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641688766 |
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| Product | type III secretion system ATPase |
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| Protein accession | YP_001815630 |
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| Protein GI | 172064918 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
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| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family
[TIGR02546] type III secretion apparatus H+-transporting two-sector ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0901897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACA GCGCGGACGA TCTCCGAACC GGCGAAGCGA GCGGGACGCC GGAAGCGCAA
CACCATGCCG TGCGCGGTTT TTCGGCGCTG GCGGATGCGA TGGAGCGCGA ACTGCGCGCC
CGCGCGCAAC CCGCGGCATG CGGCAAGGTG CAGGAAGTAA TCGGCACGCT GGTACGCGTA
TCGGGCCTCG ACGCGACGCT CGGCGAGCTG TGCGAGCTGC GCTCGCCCGA AGGCGCATTG
CTGCAGCGTG CGGAAGTGGT CGGATTCTCG CGCGACGTCG CGCTGCTTTC GCCGTTCGGC
CGGCTCGGCA GCGTGTCGCG GGCCACGCGC GTGGTGGGGC TTCGGCGGCC GCTTTCGCTG
CGCATCGGCC CTCGCCTGCT CGGCCGCGTG ATCGACAGCC TCGGCGAGCC GATCGACGGC
AAGGGGCCGC TCGAATGCGA CGAGTGGCAG CCCGTGATCG CCGATCCGCC CGATCCGATG
TCGCGGCCCG TCGTCGACAC GCCGATGCCC ACGGGCGTGC GCGTCGTCGA CGGCATGATG
ACGCTGGCCG AGGGGCAGCG CATGGGCATC TTCGCACCGG CGGGCGTGGG CAAGAGCACG
TTGATGGGTA TGTTCGCGCG CGGTGCGCGC TGCGACGTCA ACGTCATCGC GCTGATCGGG
GAGCGTGGCC GCGAAGTGCG CGAATTCTGC GAGCACATCC TCGGGCCCGA CGGAATGGCC
CGCTCCGTGG TCGTCTGCGC CACCTCGGAC CGCTCGTCGA TCGAGCGCGC GAAGGCCGCT
TATGCGGCAA CGGCAGTGGC CGAATACTTC CGCGACCGCG GCATGCGCGT GCTGCTGATG
ATGGATTCGC TGACGCGCTT TGCGCGCGCG CAGCGCGAAA TCGGCCTCGC GATGGGCGAG
CCGCCGACAC GGCGCGGCTT TCCGCCGTCG ATCTTCGCGG AGTTGCCGCG GCTGCTCGAG
CGTGCGGGCC GCTCGGCGCT CGGCTCGATC ACCGCGCTCT ATACGGTGCT GGCCGAGGAC
GAATCGGGCG GCGACCCGAT CGCCGAGGAA GTGCGGGGGA TTCTCGATGG CCACATGATT
CTGTCGCGCG AGATCGCCGC ACAGAACCGC TATCCGGCGA TCGACGTGCT CGGCAGCCTC
TCGCGGGTGA TGACGCAGGT CGTTTCGCGC GAGCACGTGG CGGCGGCCGG GCACGTGCGG
CGGCTGATGG CCAAGCACAA GGAGGTCGAA CTGCTGCTGC AGGTGGGCGA GTATCAGAGC
GGCACCGATG CGCTTGCCGA CGAAGCCATT GCAAAGATCG ACGCGATTCG GGATTTCCTC
GGGCAGCCGA CCGATCTGCT CGTCGATCCG GACGACACAA TCGCGGCCCT GGGCGAGATC
GTCCAGTCCT GA
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| Protein sequence | MIDSADDLRT GEASGTPEAQ HHAVRGFSAL ADAMERELRA RAQPAACGKV QEVIGTLVRV
SGLDATLGEL CELRSPEGAL LQRAEVVGFS RDVALLSPFG RLGSVSRATR VVGLRRPLSL
RIGPRLLGRV IDSLGEPIDG KGPLECDEWQ PVIADPPDPM SRPVVDTPMP TGVRVVDGMM
TLAEGQRMGI FAPAGVGKST LMGMFARGAR CDVNVIALIG ERGREVREFC EHILGPDGMA
RSVVVCATSD RSSIERAKAA YAATAVAEYF RDRGMRVLLM MDSLTRFARA QREIGLAMGE
PPTRRGFPPS IFAELPRLLE RAGRSALGSI TALYTVLAED ESGGDPIAEE VRGILDGHMI
LSREIAAQNR YPAIDVLGSL SRVMTQVVSR EHVAAAGHVR RLMAKHKEVE LLLQVGEYQS
GTDALADEAI AKIDAIRDFL GQPTDLLVDP DDTIAALGEI VQS
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