| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5630 |
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| Symbol | |
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| ID | 6182445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 135639 |
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| End bp | 136547 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641688762 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001815626 |
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| Protein GI | 172064914 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0341867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA CCCTTACCGA CAGCCGGATC GTCTATTTCT ACGAGGCCGT GCGCTGCGGC
ACGATCCGCG CCGCGGCCGA CTGGCTCGAC GTGGCGCCCT CGGCCGTGAG CCGCCAGATC
GGATTGCTGG AGAAGGAGCT CGACGCCACC CTGGTCGAGC GCCACGCGCG CGGCGTGACG
CCCACCGACG CTGGACGCTG CGTGATCGAG TATTTCCGTG AGCAGCTCGC GCACCGCGAC
GATCTGATCT CGCGCCTGCA GGAACTGCGC GGGCTCAAGA CCGGCCAGGT CAGCCTTGTG
CTCGGCGAGG GCTTCGTCTC CGATCTACTG GCCGGGCCGA TGCAGCAGTT CTGCCGGCAG
TTCCCCGGGA TCCGTGTCAA CCTCGACGTG GGCAGCACCA ACGACGTGAT CCGCAAAATC
TCGAACGACG AGGGCGAGAT CGGCCTGGTC TACAACCCGC CCGCCGAGCC CAAGCTGGTG
TCGCGCGCGT CGAAGCGGCA GCCGATGATG GCGATCGTCG GCCCCGACTT CCCGCGCCGC
AGCCACAAGG TACTGACGGT GCAGCAGCTC GCCACCTACC CGCTGGCGGC CACCCACCCG
TCCTACGGCA CGCGGCAGAT GATGGAGGCC GTGGAATACG CCGAGCGCGT ACGGCTCGCG
CCGATCATCA CCACCAATTC CTTCGCGATC CTGAAGGAAT TCGTGAAATC GGGGCTCGGC
ATCTCGGTGA TGCCGGCTTT CGCGGTGGCG GCCGAACTGC AGGCCAAGGA ACTGTTCGCG
ATCGAGATCG CGCATCCGAT TCTCGAGAAC GCCGAGGCGC ACATGGTCAC GCGCGTGGGC
CGCAAGCTCT CGGTGGCCGC CAACAAGATG CTGCAGATGA TGACGGGGCA GATGCGGGCG
TTCCGTTAG
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| Protein sequence | MSDTLTDSRI VYFYEAVRCG TIRAAADWLD VAPSAVSRQI GLLEKELDAT LVERHARGVT
PTDAGRCVIE YFREQLAHRD DLISRLQELR GLKTGQVSLV LGEGFVSDLL AGPMQQFCRQ
FPGIRVNLDV GSTNDVIRKI SNDEGEIGLV YNPPAEPKLV SRASKRQPMM AIVGPDFPRR
SHKVLTVQQL ATYPLAATHP SYGTRQMMEA VEYAERVRLA PIITTNSFAI LKEFVKSGLG
ISVMPAFAVA AELQAKELFA IEIAHPILEN AEAHMVTRVG RKLSVAANKM LQMMTGQMRA
FR
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