| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5628 |
|---|
| Symbol | |
|---|
| ID | 6182711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 133051 |
|---|
| End bp | 134568 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641688760 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_001815624 |
|---|
| Protein GI | 172064912 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.439175 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0149056 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGC ACGCAGACCA GTTGCTCGCC GCCTTCGCGC ATTTCTTCCC CGGCGCCGCC
ACGATCGGCT CGTATATCGA CGGCGAGCTC GTCGCCGGCC AGGGCGACAT GATCCAGCTT
TACGATGCGG CGACGGGCGA GGCCACGCTC GCCTATCGCG ACGCCGGCGC AGCCGTGATC
GGCCATGCCG CCGAAAGCGC GCGCCGCGCG CAGCGCGAAT GGTGGGCGCT CACGCATGCC
GCGCGCGGCC GCGTGATGCA GGAGGTGGCG CGCGCGATCC GCGCCGAGGC CGAGGCGATC
GCGCGGCTGG AGGCGCTGGG CTCGGGCAAG CCGATCCGCG ACTGCCGGGG CGAGGTGGGC
AAGGTCGCCG AGATGTTCGA GTACTACGCG GGCTGGACCG ACAAGTTCTA CGGCAGCGTG
ATCCCGGTGC CGACCTCGCA CCTCAACTAC ACGCGCCGCG AGCCGGCCGG CGTGGTGCTG
CAGATCACAC CCTGGAACGC GCCGGTGTTC ACCTGCGGCT GGCAGGTGGC GCCCGCGGTG
GCGATGGGCA ACGGCGTGCT GCTCAAGCCC TCGGAGCTGA CGCCCTTCAC CTCGCTGGCG
GTCGCCAGCC TCGGCGAGCG GGCCGGGCTG CCACGCGGCC TGGTCAACGT GCTGGCCGGC
TTCGGTCACA CCGTCGGGCA GGCCGCGATC GCGCATCGCG TGGTGAGCAA GGTGGTATTC
GTCGGCTCGC CGGCCACCGG CGCGCGCATC GCCGAGGCCG CCGCGCGCCG CGTGCTGCCC
TGCGTGCTGG AGCTGGGCGG CAAGTCGGCC AATATCGTGT TCGCCGACGC CGACCTCAAG
CGCGCCGCGC TGACCGCGCA GGCGGCGATC TTCGCCGGCG CGGGCCAGAG CTGCGTGGCG
GGCTCGCGTC TGCTGGTGCA GCGTGCCGTC TACGACGAAT TCGTCGCGAT GGTCGCTGCC
GGCGCGAAGA AGATCCGCGT CGGCGCACCG CTCGACGATG CGACCGAGGT GGGCCCGATC
AACAATCGCA AGCAGTACGA CCACGTGATA TCGATGATCG CGCGCGGCGT GGCGGCTGGC
GCCACGCTCG CCGCCGGCTC GGCCGAGCGT GTCGGAGAGG GCCGCGGCGG CTACTTCGTG
GCGCCCACCG TGCTGGCCGG CGTGTCGAAC GCGATGGAGG TCGCGCGCAC CGAGATCTTC
GGGCCGGTGG TGGCCGCCAT CCCGTTCGAC ACCGAGGACG AGGCGATCGC GATCGCCAAC
GACACCGACT TCGGCCTGGC CGGCGCGGCC TGGACCACCG ACGTGGCGCG CGCGCATCGC
GTGGCCGCGC AGGTGAACGC CGGCACCTTC TGGGTCAACG GCTACAAGAC CATCAACGTG
GCCTCGCCGT TCGGCGGCTA CGGCATGAGC GGCTATGGCC GCTCGAGCGG GGTCGAGGCG
CTGTACGAAT ACACGCAGAC CAAGAGCGTG TGGGTCGAGA CGGCCGAAGC GCCGCCCACC
GCGTTCGGTT ATCTGTAA
|
|---|
| Protein sequence | MTQHADQLLA AFAHFFPGAA TIGSYIDGEL VAGQGDMIQL YDAATGEATL AYRDAGAAVI
GHAAESARRA QREWWALTHA ARGRVMQEVA RAIRAEAEAI ARLEALGSGK PIRDCRGEVG
KVAEMFEYYA GWTDKFYGSV IPVPTSHLNY TRREPAGVVL QITPWNAPVF TCGWQVAPAV
AMGNGVLLKP SELTPFTSLA VASLGERAGL PRGLVNVLAG FGHTVGQAAI AHRVVSKVVF
VGSPATGARI AEAAARRVLP CVLELGGKSA NIVFADADLK RAALTAQAAI FAGAGQSCVA
GSRLLVQRAV YDEFVAMVAA GAKKIRVGAP LDDATEVGPI NNRKQYDHVI SMIARGVAAG
ATLAAGSAER VGEGRGGYFV APTVLAGVSN AMEVARTEIF GPVVAAIPFD TEDEAIAIAN
DTDFGLAGAA WTTDVARAHR VAAQVNAGTF WVNGYKTINV ASPFGGYGMS GYGRSSGVEA
LYEYTQTKSV WVETAEAPPT AFGYL
|
|---|
| |