| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5622 |
|---|
| Symbol | |
|---|
| ID | 6182705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 125333 |
|---|
| End bp | 126055 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641688754 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_001815618 |
|---|
| Protein GI | 172064906 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4215] ABC-type arginine transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.129998 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.660092 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATTC TTGAAATGCT CGGCTTCGGT ACCGAGGGCT GGGGCGGCGT GCTGTTGCTC
GCCGCGCTGA TGACGGTCGC GCTGACGCTC GCCGCGCTCG CGGTCGGCGC CGTGATCGGC
GCGGCGATCG CGGCGGCCAA GCTGTCGCGC CACCGCAGCG CCCGCCTGCT CGGCGACCTG
TACACGACGG TGTTTCGCGG CGTGCCCGAA CTGCTCGTCA TCTATCTGTT CTACTTCGGC
GGCTCGACGC TCGTCACGAC CGTCGGCCAG TGGTTCGGCG CGGAAGGCTT CATCGGCGTG
CCGCCGTTCG TGATCGGCGC ACTCGCCGTC GGGATGATCT CGGGCGCCTA TCAGGCCGAG
GTGTATCGCG CGGCGGTGCT CGCGGTGTCG AAGGGCGAGC TCGAAGCGGC GCGCTCGATC
GGCATGCCGC GCGCGATGGT GCTGCGCCGC ATCCTCGTGC CGCAGGTGCT GCGCTTCGCG
CTGCCCGGCA TCGGCAACGT GTGGCAGCTG AGCCTGAAGG ATTCGGCGCT GATCTCGGTC
ACGGGCCTCG CCGAGTTGCT GCGCACGAGC CAGATCGCGG CGAGCTCGAC GCATCAGTAC
TTCGTGTTCT TCGTCGCGGG CGGCGCGCTC TACCTGGTCA TGACGGGCCT GTCGAACCGC
GTGTTCAACC GGGCCGAAGC GATCGTCGGC CGCTCGTTCC GCCGCAATTT CGCGCGCAAC
TGA
|
|---|
| Protein sequence | MAILEMLGFG TEGWGGVLLL AALMTVALTL AALAVGAVIG AAIAAAKLSR HRSARLLGDL
YTTVFRGVPE LLVIYLFYFG GSTLVTTVGQ WFGAEGFIGV PPFVIGALAV GMISGAYQAE
VYRAAVLAVS KGELEAARSI GMPRAMVLRR ILVPQVLRFA LPGIGNVWQL SLKDSALISV
TGLAELLRTS QIAASSTHQY FVFFVAGGAL YLVMTGLSNR VFNRAEAIVG RSFRRNFARN
|
|---|
| |