| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5612 |
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| Symbol | |
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| ID | 6182695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 112617 |
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| End bp | 113522 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641688744 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001815608 |
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| Protein GI | 172064896 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0432905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.551599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAAT TCTCCGCGCT GCGCGCGTTC GTTGAAGTAG CGGAAGCCGG CGGCTTCTCC
AGCGCAGGGC GCCGCCTCGA TCTCGCCGCT TCGTCGGTGG TGCGCGCGGT AGACGCGCTC
GAGGCATCGC TCGGCACCGT GCTGCTGAAC CGCACCACGC GACAGGTCAC GTTGTCCGAT
GCGGGCGCCG TCTACTATGC GCGGGCGAAG CAGCTGCTCG AGGCGCTTGC GGAGGCCGAT
GCACTCGTCG CCGATCGCGG CGACGAACCG TCAGGACCGC TGCGGGTGTC CGTGCCGGTC
GCATACGGCA TGCACCGCAT CGCACCGCAG GTCGGCGCAT TCCTCGCGCG CTATCCCAGG
CTCGATCTCG ATCTGCAACT CACCGACGCA CGCGTCGATC TCGTCACCAG CCGGATCGAC
GTCGCGATCC GGCTCGGCGA AGCCGCGCCG TCCGCGGAAG TCGTCGCACG GCAGCTCGGC
ACGTTCCGGC GGTATGTCGT GGCGAGCCCC GACTATCTCG ACGCGCACGG CACGCCATCG
ACGCCGGGTG AGCTGGTCGA TCATGGCTGC CTGCGCTTTC ACTTCGGTGG CGATCAGCAG
GCGTGGTCGT TCGTCGATGC GCACGGCGCG ACGAAGGTGC TCGTCACCGG GCGACTGAAA
TCGAACCACA GCGAAGTATT GCGCGCCGCC GCGCTCGATG GCGGCGGCAT CGCGCTGCTG
CCCGACTGGC TGGTCGATGC CGACGTCCGG GCGGGCCGCC TGCGCAGGCT GTTCGAACAG
TACGACGTCG TGCCCGACGC GGCACGCTCG ATCGTCACCG CGCTCTACCT GCCGAATCAG
CGGGGCTCGA AGCGCGTCAC CGCGTTCATC GATTTTGTCG AGGCGCAGGC TCGCACGCCG
TGCTGA
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| Protein sequence | MDKFSALRAF VEVAEAGGFS SAGRRLDLAA SSVVRAVDAL EASLGTVLLN RTTRQVTLSD
AGAVYYARAK QLLEALAEAD ALVADRGDEP SGPLRVSVPV AYGMHRIAPQ VGAFLARYPR
LDLDLQLTDA RVDLVTSRID VAIRLGEAAP SAEVVARQLG TFRRYVVASP DYLDAHGTPS
TPGELVDHGC LRFHFGGDQQ AWSFVDAHGA TKVLVTGRLK SNHSEVLRAA ALDGGGIALL
PDWLVDADVR AGRLRRLFEQ YDVVPDAARS IVTALYLPNQ RGSKRVTAFI DFVEAQARTP
C
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