| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5609 |
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| Symbol | |
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| ID | 6182692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 107196 |
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| End bp | 110042 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641688741 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001815605 |
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| Protein GI | 172064893 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0160081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.519557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAGA TCGGGGCTTT ATCGGTGGAT TTCGAGCAGC GCGACATTCG CCGTCACGGC
GCTGCGCTGC GGATTGGCGC GCGCGCGCTC GACATACTTG AAGTACTGCA TCGCGCCAAC
GGTTCCGTCG TGTCGAAGGA CGACATCATG GATGCCGTCT GGCCCGGCCT GATCGTCGAG
GAGAACCGGC TGCAGGTTCA TGTCGCGGCG TTGCGCAAGG CGCTCGGCGC GAGCCGCGAC
CTGATCAAGA CCGTCCCGGG CCGCGGGTAC CTGCTGGTCG CGAATCCGCC GCTCCTGCAC
GCGGTGGCGC CGCATCCGGC TGCCACGGCG CCGGGCGCCG AAGCGGTCCA TCAGGCCCCG
CTCGTCGGAC GCCGCGCCGA GCTCGAGCAG ATCGTCGACA TGATCGACCG TGCGCCGGTC
GTCACGCTCG TCGGCGCGGG CGGTATCGGC AAGACGAGTC TGGCCGACCA CGTCGCGCAC
ACGTGGCGCA GCCGGGACGG CGAACGCGTG CTATTCGTCG AACTGGCGCG AGCCACGACG
CGCGACGACG TGCTGCTCGC GATTGCCGAG GAACTGGGGC TCGACATGCA TGGCGTGCCG
GCCGTCGACC GGATCGGCGA CGCATTCGCC GTGTCGCGCA GCCTGCTCGT GCTCGACAAC
GCGGAGCACG TCGTCGATCT GGTTGCCGAC CTCGTCGAGT CGCTGGCGGC GCGCGTCGTG
CCGCTGCGGG TGCTCGTGAC GAGTCGCGAG CCGCTTCATA TCTCGGTCGA AACCGTGTTT
CGCGTGAGTC CGCTGGCGGT GCCCGACGGC GCCGCAACGG TCGACGAGAT CGTGCGTCAT
TCGGCGGTCG AGCTGTTTCT GGCGCGGGTT CGCGCGGCCA CGCCCGAGTG CGTGATCGAC
GCGGCGGGTG TCCGGCTGAT CGGCGATATC TGCCGGCGGC TCGACGGGCT TCCGCTCGCG
ATCGAACTGG CTGCCGCGCG CGTCGCGACG CTCGGGCTCG AGGTCGTCGC GTCGCGTCTC
GACGACCGGC TGAACCTGCT CACGGGCGGC CTGCGCTCAG CGTTGCCGCG CCATCAGACG
CTGCGCGCGA CGTTCGACTG GAGCTATGTG CTGCTGGATG CGGCCGCGCG TGCGCTGTTT
CGCCGGATGG CGTGCTTCGT CGGCCCGTTC ACGTTCGATG CGGCCCGCGA AGTCGCGATG
GATCCCGGCA TGTCGCCCGC CGAAATGATC GCGGTGCTCG GCGAGCTGGT CGCGAAGTCG
CTGGTGACCG TCGAATTCAA CGGCGCGCAG GCGCGCTACC GATTGACCGA ATCGACGCGC
GCGTATGCGC TGGAGAAGCT GCATAACGAG GGCGAGTTCG AACGCATCGC CGAGTGTCAT
GCGCGCCATG AACACGCGCA GGCCCAGCCC CGGATGCCGG CTCACGTGCA AGCCGCGCGC
GAACCCGCGG CGGCCGAGCC GCCGGTCGCG GAAGCGGACG CGCTGGCGCT CGCATTGCGG
GAGCCAGCGC GCATGCGTGA CTGTTCGAGC CCGGCGAAGC GCATGCTCGA TGCCATCGAG
GCCGGCGCGC TCGGTGCCGT CGACGCGTCG AGCGAGATGC GGCTGCGCGC GGCCTATGCG
TCGGCGCTGC TGTATACGGA CGGCGATACG CAGACGGCCG CCGCGATGTG GGAGCGCACG
CTCGGCCTCG CCGGGCGGGT CGGCGACGAC GCATTCGATG CCAGCGCGAT GGTCGGGCTC
TGGAACGCGA CGCTGTCGCA CGGCGACATT CACGAATCGC TACGCTACGC GATGCGCTTC
GAGCGGGCGG CCGAGCGGCG CGGCGACCGG CCGCAACGGC TGCTGGCGAA CGCGATGGTC
GCGACTTCGC TGCATTACTT CGGCGAGCAT GCGCAGGCGC GCGAGCGGCT GGAGGCGGCC
ACGGCCGAAC TCGCGGTGGC CGGCGAACCG CCTTGCGCGG CAGCGGCGCT CGGCATCGAC
GTCGCGACGC TCGGCCGCAC GGTGCTGGCG CGGCTCGTCT GGATGCAGGG CGATGTGGAC
CATGCGATGC GGCTCGCCGC GCAGGCGGTC GAATCCGCGC GCCGCGGCGG GTCGGCGCTG
GCGTTGTGCG TCGTGCTCGG CGCGGCGGCC GTGCCGATCG CGTTGCGCCA TGGCGATCAC
GACATCATCT CCGACTATCT CGCGACGCTG CGCTCGGCCG CCGAGGCGAA CGGCTTCGAT
ATCTGGCTCG ACCATGCGGA ATGTCTCGCG GGCCAGTTCG ACATGCAGGC CGGCCATCCG
GGCGCCGGGC TGGCGCGGCT CGAACCCGCG CTGCGACGCA TCGAGGCGAG CGGCTTCCGG
CGCCTGCTCG CGCCGCTGGT GGTCGCGTAT GCGGAAGGGC TCACGCGCAC GGGCCGCGCG
GCCGAGGCCC GCGTGAAGCT CGACGCGACG CTCGCGTGCT GCCGCGCGCA AGGCGAGCAT
TTGTTCGTGC CCGAGCTGCT GCGTGCGAGA GGTCTGGCGA TGCTCGAACA GGCCCGCACC
GCCGACGAGG AGCGCGCGAT CGCCTGCGAA GCGGACGGGC ACCGGCATCT GCTGATGGCG
ATCCATGCGG CGAACGGGCA AGGTGCGGCG ATGTGGGCGC TGCGCGGCAC GCTCGATCTC
GCCGATCATC TGATCGAGCG CGGGCGTATC GGGCAGGCAT CGTCGCTGGT GGCGAACCTG
TCGGGGCATT TCGACCCGCA ATCGCGCGCG GTCGACGTGC GGCGCCTCGC GCGGGTGCAG
AGCTTCATCC GCTCGGAGAC GGTGCGGCCG AGCGGTCATG CGCACATCCG TCACGAGACC
CTGGATGCGA TGCAATCGGC TGCGTGA
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| Protein sequence | MIQIGALSVD FEQRDIRRHG AALRIGARAL DILEVLHRAN GSVVSKDDIM DAVWPGLIVE
ENRLQVHVAA LRKALGASRD LIKTVPGRGY LLVANPPLLH AVAPHPAATA PGAEAVHQAP
LVGRRAELEQ IVDMIDRAPV VTLVGAGGIG KTSLADHVAH TWRSRDGERV LFVELARATT
RDDVLLAIAE ELGLDMHGVP AVDRIGDAFA VSRSLLVLDN AEHVVDLVAD LVESLAARVV
PLRVLVTSRE PLHISVETVF RVSPLAVPDG AATVDEIVRH SAVELFLARV RAATPECVID
AAGVRLIGDI CRRLDGLPLA IELAAARVAT LGLEVVASRL DDRLNLLTGG LRSALPRHQT
LRATFDWSYV LLDAAARALF RRMACFVGPF TFDAAREVAM DPGMSPAEMI AVLGELVAKS
LVTVEFNGAQ ARYRLTESTR AYALEKLHNE GEFERIAECH ARHEHAQAQP RMPAHVQAAR
EPAAAEPPVA EADALALALR EPARMRDCSS PAKRMLDAIE AGALGAVDAS SEMRLRAAYA
SALLYTDGDT QTAAAMWERT LGLAGRVGDD AFDASAMVGL WNATLSHGDI HESLRYAMRF
ERAAERRGDR PQRLLANAMV ATSLHYFGEH AQARERLEAA TAELAVAGEP PCAAAALGID
VATLGRTVLA RLVWMQGDVD HAMRLAAQAV ESARRGGSAL ALCVVLGAAA VPIALRHGDH
DIISDYLATL RSAAEANGFD IWLDHAECLA GQFDMQAGHP GAGLARLEPA LRRIEASGFR
RLLAPLVVAY AEGLTRTGRA AEARVKLDAT LACCRAQGEH LFVPELLRAR GLAMLEQART
ADEERAIACE ADGHRHLLMA IHAANGQGAA MWALRGTLDL ADHLIERGRI GQASSLVANL
SGHFDPQSRA VDVRRLARVQ SFIRSETVRP SGHAHIRHET LDAMQSAA
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