Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5608 |
Symbol | |
ID | 6182691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 105158 |
End bp | 107038 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641688740 |
Product | amidohydrolase 3 |
Protein accession | YP_001815604 |
Protein GI | 172064892 |
COG category | [R] General function prediction only |
COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0446868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.586515 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTAAGG CGACGCAATC CGCGCAATCG GCGGACCTCA TCGTATTCAA CGGCAAGATC GCGACGCAGG ACGACAGGCA GTCGTTCGTG ACCGCGCTCG CGGTGAAGGA CGGCCGGATT CTCGCGGCCG GCAGCGCACC CGAGGTCATG CGCCATGCGC GGAGCGACAC GCTTCACATC GACCTGAACG GCCGCACCGT GATCCCGGGG CTGAACGACT CGCACCTGCA CGTGATCCGC GGCGGCCTGA ATTTCAACCT CGAACTGCGC TGGGACGGCG TGTCGACGCT GGCCGAGGCG CTGCGCATGC TGCGTCGCCA GGTGCTGCGC ACGCCCGCGC CGCAGTGGGT GCGCGTCGTC GGCGGCTGGA CCGAATTCCA GTTCGCCGAA AAGCGCGGGC CGACGGTGGC CGAACTCAAC GCGATCGCGC CCGACACACC GGTGTTCGTG ATGCACCTGG GCGACAGCGC GCTGCTGAAC GCGGCCGCGC TGCGCGCGAT CGGCTATGGC CGCGACACGT GCGATCCGCC CGGCGGCGAG ATCCAGCGCG ATCGCGCCGG CCGGCCGACC GGCATGCTGC TCGCGCGCCC GGACGTGGCC GTCCTGCATG CGGCGCTGGA GAAGGGCCCC AGGCTCGGCT TCGACGACCA GATGAATTCG ATGCGGCACT TCATGCGCGA GCTGAACCGC CTCGGCGTGA CCAGCGCGAT CGACGCCGGC GGCGATTTTC AGGCCTATCC GGACGATTAC GCCGCGCTCA TGGCGCTCGC GAAGCGCGGC GAAATGACGG TGCGCATCGC GTACAGCCTG TTCGTGCAGC GTGCGGGGCG CGAAATCGAC GACTGCGCGC GATGGATGAC GCTGGCGAAG CCCGGCGACG GCGACGCGTT CCTGCGGCTG AACGGCGTCG GCGAACTGCT GGTGTATTCC GCGGCCGATT TCGGCAATTT CCTCGAACCG CGCCCGGACC TGCCCGACGA GCTCGAGGCG GAACTGACCG CGGTCGTGCG GCTGCTGGTC AGCCAGCGCT GGCCGTTCAG GCTGCACGCG ACGTACGACG AATCGATCGG CCGCTTCCTG AACGTGCTCG AAGCCGTGAA TCGCGACGTC CCGTTCGACG GCCTGCGCTG GTTCTTCGAT CATTGCGAGA CGATTTCGGA TGCGAACATC GCGCGCATCG CGGCGCTCGG CGGTGGCGTG ACGGTGCAGC ACCGGATGGC GTTCCAGGGC GAGTACTTCA TTGCGCGCTA CGGCGCGCAA GCCGCCACGC GCACGCCGCC GATCCGCGCG ATGCTGGCGG CCGGGCTGCC GGTCGGTGCC GGCTCCGACG CGACGCGCAT CGCGAGCTAC AACCCGTTCG TGTCGCTGTA CTGGATGGTG TCCGGGCGGA CGGTCGGCGG CACCGTGCTC TATCCGGAGG GCAATCGGCT CAGCCGGATG GAGGCGCTGC GCCGCTATAC GGTCGGCAGC GCGTGGTTCT CGAACGAAGA CGATCGAAAG GGCGCGCTGT TGCCCGGCCG GTACGCGGAT TTCGCGGTGC TGACGGACGA CTACTTCACG ATCGACGAGT CGCACATCAA GCACCTGTCG TCGGTCCTGA CGATCGTCGA CGGCAAGGTC GTGCACGCGG ACGACGAATT CGCGCCGCTG GCGCCGCCGC CGCTGCCGGT GAGCCCCACG TGGTCGCCCG TGGCCGAGTT CGGCGGCATG GGCCGGTGGC GCCCGGTCGC GTCGGCGCAG CCGCGAGCCG CGGCCGACGG CGGCCGCGAT GCCGGTTTCG CGCGCGAATA TGGACGTCGT TTCGCGCGGC GCCTCGATGC GGCCGCGACG GAACTCGCCG AGCCGTGCAG CGCGTTCGGT TGCCTCGGCG CTGCTTTTTA G
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Protein sequence | MLKATQSAQS ADLIVFNGKI ATQDDRQSFV TALAVKDGRI LAAGSAPEVM RHARSDTLHI DLNGRTVIPG LNDSHLHVIR GGLNFNLELR WDGVSTLAEA LRMLRRQVLR TPAPQWVRVV GGWTEFQFAE KRGPTVAELN AIAPDTPVFV MHLGDSALLN AAALRAIGYG RDTCDPPGGE IQRDRAGRPT GMLLARPDVA VLHAALEKGP RLGFDDQMNS MRHFMRELNR LGVTSAIDAG GDFQAYPDDY AALMALAKRG EMTVRIAYSL FVQRAGREID DCARWMTLAK PGDGDAFLRL NGVGELLVYS AADFGNFLEP RPDLPDELEA ELTAVVRLLV SQRWPFRLHA TYDESIGRFL NVLEAVNRDV PFDGLRWFFD HCETISDANI ARIAALGGGV TVQHRMAFQG EYFIARYGAQ AATRTPPIRA MLAAGLPVGA GSDATRIASY NPFVSLYWMV SGRTVGGTVL YPEGNRLSRM EALRRYTVGS AWFSNEDDRK GALLPGRYAD FAVLTDDYFT IDESHIKHLS SVLTIVDGKV VHADDEFAPL APPPLPVSPT WSPVAEFGGM GRWRPVASAQ PRAAADGGRD AGFAREYGRR FARRLDAAAT ELAEPCSAFG CLGAAF
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