Gene BamMC406_5606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5606 
Symbol 
ID6182689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp103224 
End bp104336 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content70% 
IMG OID641688738 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001815602 
Protein GI172064890 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.614361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.874995 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCC TGCTCAGCAC CTACGATCTG CGCGGCCTGC CGCTGCCCAA CCGAGTCGTG 
ATGGGGCCGA TGACGCGCTC GCGCGCACCA TCGCGCGGCC AGCCGACCGC GCTCATGGCC
GAGTATTACG CGCAGCGCGC GTCCGCCGGC CTGATCGTCA CCGAGGCGAC CAACGTCAGC
CACACGTCCG CGGCGTTCGA ACTGACGCCC GGGCTCGTCA CCGACGAGCA GGCGGCCGGC
TGGAAGCAGG TCACGGACGC GGTCCATGCG AATGGCGGCC GCATCTTCGC GCAGCTGTGG
CACGGCGGCC GCGTCAGCTC GCTGACGCTG CTCGGCGGCG ACGCGCCGCT GTCGCCGTCC
GGCGTCAACG ACGATCTCGA GCAGTTGCAG GTGTGGGCCC GGTTGCAGAA CGGCTATTAC
ACGAAGATTC ACGCGACGCC GTCGCGCGCG ATGACGACGG ACGAAGTCGC CGCAACGGTC
GACGACTTCG GCCGCGCGGC CGCCCGCGCG ATGGCGGCCG GCTTCGACGG CGTCGAGATT
CACGCGGCCA ACGGCTACCT GCCGCACCAG TTCCTGTCAT CGACGCTGAA CCGCCGCGAC
GACCGCTACG GCGGCTCGGT CGCGAACCGC GCGCGCTTTC TCGAGGAGAT CGTCGCCGCG
GTCGGCGGCG TGATGCCGCT CAGCCGCGTG GGCGTGCGCA TCTCGCCGTA CGCGCAATAC
AACAACGTGC GGGACGCGGA TCCGGATGCG ACGTACGCGT ACGTCGGCCG CATGCTCGAC
GAAGCGGGCG TCGCCTACCT GCACGCGGCC GATACCAACG GCTGGAGCGG CGAGCCCGAC
CTGCCGCGCA TCATCGAGCA CACGCGCAAG GCCTTCGGCG GCACGCTGAT CGTCAACGGC
GGCATCACGC CGGACGCCGC GAATGCGCTG ATCGATGCGG GCGACGCCGA TCTCGTCGCG
TTCGCGCGGG CCTACATCGC GAACCCGGAT CTCGTCGAAC GCATCGCCAC GCATGCGCCG
CTCGCCGTGC CGAAGTCGAT CGGCTGGTAC GGCGGCGAGC GTGCGGGATA CGTCGACTAT
GCGCGGCACG ACGCGGCGGC GCCAATCGCC TGA
 
Protein sequence
MSSLLSTYDL RGLPLPNRVV MGPMTRSRAP SRGQPTALMA EYYAQRASAG LIVTEATNVS 
HTSAAFELTP GLVTDEQAAG WKQVTDAVHA NGGRIFAQLW HGGRVSSLTL LGGDAPLSPS
GVNDDLEQLQ VWARLQNGYY TKIHATPSRA MTTDEVAATV DDFGRAAARA MAAGFDGVEI
HAANGYLPHQ FLSSTLNRRD DRYGGSVANR ARFLEEIVAA VGGVMPLSRV GVRISPYAQY
NNVRDADPDA TYAYVGRMLD EAGVAYLHAA DTNGWSGEPD LPRIIEHTRK AFGGTLIVNG
GITPDAANAL IDAGDADLVA FARAYIANPD LVERIATHAP LAVPKSIGWY GGERAGYVDY
ARHDAAAPIA