Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5598 |
Symbol | |
ID | 6182681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 93546 |
End bp | 94367 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641688730 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001815594 |
Protein GI | 172064882 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.33887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACGT TCACGACACG CGACGGCGTC TCGATTCACT ACAAGGACTG GGGCGCGGGG CGCCCGGTCG TGTTCATTCA CGGCTGGCCG CTGAATGCGG ACATGTGGGA CGTCCAGATG CATCATCTTG CATCGAACGG TTTTCGCGCC ATCGCGTACG ACCGGCGCGG TTTCGGCCGG TCTGGCCAAC CGTGGACGGG CTACGACTAC GATACGCTCG CGGACGATCT CGCGACACTG ATCGAGACGC TCGGATTGCG CGACGTGACG CTCGTCGGCT TTTCGATGGG CGGCGGCGAG GTGGCCCGAT ACATCGGCCG GCACGGCACG CGCCACATCG CGAAGGCGGT GCTGATCGGC TCGGTGACGC CGCTCATCGC GCGGCGCGAC GATCATCCGG ACGGCGTCGA CGTCGCGATG TTCGACGGCA TTCGCTCGGC GATCGTGGCG GACCGCCCCG CGTTCTTCGA GCAATTCTGG CCGTTGTTCA CCGGCTCGAA CCGGGCCGAT TCGACGATCT CGCGCGCCAC GCTCGACTGG ACGTCGTTCA TGGCGCTGCA GGCCGGATTG AAGGGCACGC TCGATTGCGT CCGTGCGTTT TCCGAAACCG ATTTCAGGTC GGATCTCGAC AAGTTCGATG TACCGACGCG CGTGATTCAT GGCGACGACG ACCAGACGGC GCCGCTCGCG CTGACGGCGG CGGCTACCGC CGCGCGTGTG CCGCACGCGA CGCTGAGCGT CTACGAAGGC GCTCCGCATG CGCTGTATCT GACGCATGCC CAACGATTGA ACGACGAACT GCTGGCGTTC GTCAGCGCGT GA
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Protein sequence | MSTFTTRDGV SIHYKDWGAG RPVVFIHGWP LNADMWDVQM HHLASNGFRA IAYDRRGFGR SGQPWTGYDY DTLADDLATL IETLGLRDVT LVGFSMGGGE VARYIGRHGT RHIAKAVLIG SVTPLIARRD DHPDGVDVAM FDGIRSAIVA DRPAFFEQFW PLFTGSNRAD STISRATLDW TSFMALQAGL KGTLDCVRAF SETDFRSDLD KFDVPTRVIH GDDDQTAPLA LTAAATAARV PHATLSVYEG APHALYLTHA QRLNDELLAF VSA
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