| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5590 |
|---|
| Symbol | |
|---|
| ID | 6182673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 85570 |
|---|
| End bp | 86262 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641688722 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001815586 |
|---|
| Protein GI | 172064874 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3619] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAATCTG AAGACACCCT TCTTTCCGCG GTCGCCGGGT TCGTCGATAC GCTGAGCTTC
GTCTCGCTGT TCGGGCTGTT CACCGCACAC GTGACGGGCA ACTTCGTGCT GATCGGCGCA
GGCGTTGCCG GATTCGGGCA GGGCCTCGTG CTGAAACTGA GCGTGTTTCC CGCCTTCATA
TGCGGCGTCA TCGCGGCGAG CCTGATCGCG CGATCGTTGT CCGCGCGGCC GGCATGGCAG
GGCGCGCGTG CGCTGTATGC GGTGCAGGCC GTGATGCTGC TCGGCTTCTG TGCGGCCGGC
GTGTGGGCGA CGCCCGTCAC GCAGTCCGAC AGTCTGCCGG TGCTCGTGGC CGGCATCGTC
GGCACGTTCG CGATGGGCGT GCAGAACGCG CATCCCCGCG TGATCGCACG TGCAAGCGTG
CCGAACACGG TGATGACGGG CAACGTCACG CAGGCGATTC TCGATGTGGT CGATCTGCTG
TCCGCCGGCA CGGCCGACAG CGCGCGCGCG GCCGCACGCG CACGGTTCGG CAAGATGTTG
CCGGCGATCG TCGCGTTCGC GCTGGGCGCA ATGGCAGGCG CGCTCGGCTT TCGCTACATC
GGATTCTGGG CGCTGCTCGC GCCGGCTGGC GCGCTCGCGG CACTGGCATT GACGTCCGGC
GCGCACGACA CGGCGCCTGC CGTGCGGACC TGA
|
|---|
| Protein sequence | MKSEDTLLSA VAGFVDTLSF VSLFGLFTAH VTGNFVLIGA GVAGFGQGLV LKLSVFPAFI
CGVIAASLIA RSLSARPAWQ GARALYAVQA VMLLGFCAAG VWATPVTQSD SLPVLVAGIV
GTFAMGVQNA HPRVIARASV PNTVMTGNVT QAILDVVDLL SAGTADSARA AARARFGKML
PAIVAFALGA MAGALGFRYI GFWALLAPAG ALAALALTSG AHDTAPAVRT
|
|---|
| |