Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5578 |
Symbol | |
ID | 6182505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 79776 |
End bp | 80180 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641688710 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001815574 |
Protein GI | 172064862 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCA TCATGCTCAC GCTCGCGCCG CTTGCGCTGT CGCTGTTGAT GCCCGTCCAG CCGGCCGCCG CCGCACCGCA AGCCAAGGTT ACGACGCTGA CCACGGAGCC GTTGCCCGAG TATCCGGGCA AGGAGGTCGA GATGATCGTC GTCGATTATC CGCCCGGCAG CGTCGATCCC GTTCATCGTC ACGACGCGCA CGCATTCGTC TATGTGCTCG ACGGCAGCAT CGTGATGGGC CTGAACGGCG GGAAGGAGGT CACGCTTCAC GCCGGCGACA CATACCACGA AGGCCCAAAG GATATCCACA CGGTCGGACG AAATGCCAGC AGCACGAAGC CGGCAAAATT CGTCGTGTTC ATGATCAAGA ACCAAGGTGC GCCGATCCTC ACACCCGTGA AATAG
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Protein sequence | MKRIMLTLAP LALSLLMPVQ PAAAAPQAKV TTLTTEPLPE YPGKEVEMIV VDYPPGSVDP VHRHDAHAFV YVLDGSIVMG LNGGKEVTLH AGDTYHEGPK DIHTVGRNAS STKPAKFVVF MIKNQGAPIL TPVK
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