| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5573 |
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| Symbol | |
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| ID | 6182500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 72992 |
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| End bp | 74545 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641688705 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001815569 |
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| Protein GI | 172064857 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCT CGACGCAACC CGTACCGCCG CCGCTGACGG GCGGAAAGCT GGTCTTGGCG
ACCGTCGCCG TCGCGCTCGC GACGTTCATG AACGTGCTCG ATTCGTCGAT CGCCAACGTC
GCGATTCCGA CCATCGCGGG CAATCTCGGC GTCTCCGTCG ACGAAGGCAC GTGGGTGATC
ACGCTGTTCT CGGCGGCCAA TGCCGTCGCG ATTCCATTGA CGGGCTGGCT GACGCAGCGC
GTCGGGCAGA TCAGGTTGTT CGTGGCCGCG ATCGTGCTGT TCGTGTTCTC GTCGTGGTTG
TGCGGCGTCG CGCCGAACCT GCTCGTGCTG CTCGCTGCGC GCGTATTGCA GGGCGTCGTC
GCGGGGCCGC TGATTCCGCT GTCGCAAGCG ATCCTGCTGG GTTCGTATCC GAAGGAGAAA
AGCGCGACCG CGCTCGCGCT ATGGTCGATG ACTGCGACGG TCGGTCCGAT CGCAGGCCCC
GCGCTGGGCG GCTGGATCAC CGACAGCTAC AGCTGGTCGT GGATCTTCTA CATCAATATT
CCCGTTGGCC TGTTCGCGGC CGGCGTCACG TGGATGATCT ATCGCGACCG CGAGACGCAG
GTGCGCAAGC TTCCCATCGA CAAGGTCGGC CTGATGTCGC TCATCGTGTG GGTCGCGACG
CTGCAGATCA TGCTCGACAA GGGCAAGGAC CTCGACTGGT TCAGTTCGCC CGTGATCTGC
ACGCTTGCGG TCGTCGCCGC CATCAGCTTC CTGTTCTTCC TCATCTGGGA GTTCACGGAG
CGGAACCCGA TCGTCGACAT ACGGCTTTTC GCGGTGCGCA ATTTCCGCGG CGGCACGATT
GCGATCTCGG TCGCGTACGC GGTGTTCTTC TCGAACCTCG TGATTCTGCC GCAATGGATT
CAGGGCTATC TCGGCTATCG ATCGGTGGAC GCCGGGCTCG TCACCGCGCC GCTGGGGATC
TTCGCCGTGC TGCTGGCACC GATGATGGCG AAGATCATGC CGAAGTCCGA TGCACGGGTG
CTCGCGACGC TGGCCTTCCT CGGCTTCGCG GGCGTGTTCT TCATGCGCTC GCATTACACG
ACGAGCGTCG ACCTCTATAC GCTGGTGCTG CCGACCCTGT TGCAAGGTAT TCCGATGGCG
CTCTTCTTTA CGCCGCTGAC CGCCATCATT CTGTCGGGTT TGCCGCCCGA ACGGATTCCG
GCGGCCGCCG GCCTGTCCAA TTTCGTGCGC GTGTTCGCGG GCGGGGTCGG CACGTCGTTG
ATCGCGACGG GGTGGAACGA CCGCACGATC CTTCATCATG CCCGGCTCGC TGAGCAATCG
AGCATGAATA ACCCTGCCTA TACGAGTGCA ATTGCGCAGC TCCACGCGAC GCTCGGCGGC
GGCGTGGATC AGGCCACCGC ATTTTTCGAA CGGACGCTCA ATGCGCAAGC AGCGATGCTC
GCGCTGAACG ATATCTTCTG GCTGTCGTCG ATCATCTTCA TCGTGATCGT TCCGCTGGTC
TGGCTTACCA GGCCAGGCAA GGGCGGTGGC GGCATGGCCG GCGGCGCGCA TTGA
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| Protein sequence | MKSSTQPVPP PLTGGKLVLA TVAVALATFM NVLDSSIANV AIPTIAGNLG VSVDEGTWVI
TLFSAANAVA IPLTGWLTQR VGQIRLFVAA IVLFVFSSWL CGVAPNLLVL LAARVLQGVV
AGPLIPLSQA ILLGSYPKEK SATALALWSM TATVGPIAGP ALGGWITDSY SWSWIFYINI
PVGLFAAGVT WMIYRDRETQ VRKLPIDKVG LMSLIVWVAT LQIMLDKGKD LDWFSSPVIC
TLAVVAAISF LFFLIWEFTE RNPIVDIRLF AVRNFRGGTI AISVAYAVFF SNLVILPQWI
QGYLGYRSVD AGLVTAPLGI FAVLLAPMMA KIMPKSDARV LATLAFLGFA GVFFMRSHYT
TSVDLYTLVL PTLLQGIPMA LFFTPLTAII LSGLPPERIP AAAGLSNFVR VFAGGVGTSL
IATGWNDRTI LHHARLAEQS SMNNPAYTSA IAQLHATLGG GVDQATAFFE RTLNAQAAML
ALNDIFWLSS IIFIVIVPLV WLTRPGKGGG GMAGGAH
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