Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5568 |
Symbol | |
ID | 6182495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 68093 |
End bp | 69526 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641688700 |
Product | C4-dicarboxylate anaerobic carrier |
Protein accession | YP_001815564 |
Protein GI | 172064852 |
COG category | [S] Function unknown |
COG ID | [COG1288] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.262721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACG TCAGCAGGCA AGTCGAGAGC GTGGAGCAAC GGCGGCCAGC CCGCGCGAAC GGCGGCAGGG AGCCGATCAG CCCCTATGTG CTGCTGTTCG TCATGCTAGT GGCGGCGGTG ATCGCGACAT GGGTCGTGCC ATCGGGCGAG TTCTCGCGGA CGGTCAGCGA TGGCGTCAGC CTCGTTGTCC CCGGCAGCCT GAAACCGGTG GCTCGGCACG GCGTGTTGCC TGGCGAGATG TTTGTCGCGC TGGCCAAGGG AATGATCGCG TCCGCGCCGA TCATCTTCCT CATCCTGTTT ACCGGCGGTG CGCTGGCGGT GCTCGAGGAG ACCGGGGCTG TTCGTAGCGC GCTCGCATTG GCCGCTCAAC GGGAAGGCGC GCGGACGCAC ATCACCGTCA TCGTCCTGTG CGTCGTCTTT TCGCTGCTCG GCACCCTGGG TGTCGTGACG AATTCGGTCG TGGCGTTCGT CCCGCTTGGA CTGCTGCTGG CCGAATCGAT GGGGCTGTCG AAGGAAATGG GGGCTGGCCT GATCTATCTG AGTACCTATG CGGGCTTCAA CACGGGCATC CTCAACCCGG TGACGACCGG ACTGACCCAG CGTCTGGCCG GCCTGCCGAT GTTTTCAGGC ATGACGTTCC GCATGTGCAT CTACATCGCT TTCGTCGTGG CCACCATCAT TTTTCTCGTC GCCCGGCTTC GCTCGAGTCG AGTGAACGGC GCGGCGGTTT CCGCCTCGAC GCCGTCGATG GGCAGGGCCA TGCCGCCGCC GTCTCCGCGA CGCCCCGACA CCCGGCAACT CGTCGTCGTC GGCATCGTGC TCGTCTGCCT GTCGGTATTC GTCTATGGTT CGTCGACGCG GCACTGGGCC GAAACCGAGA TGATCGCGAT GTTCCTCGTC ATGGCGATTG CCGGCGGGAT TGCGAGCGGC ATTCGACCGG GCGAGATTGC GGACACGTTT CTGCATGGCT GCAGCGGACT CGTCAAGGGT GCGCTCGTGG TGGGGATGGC GCGAGCCATC TCGATCGTCC TCACCGACGG GAAGATCCTG GACCCGATCG TCGACATGCT CGCCGGATGG CTTGCCCCGC TCAATTCAAC GGCGGCCGCG ATCAGCATGT TCGCGAGCGC CGCGTTGATT CACGTCGGAA TCTCGTCCGG ATCGGGCGAA TCGGCGGTGC TCATCCCGAT CTTCGCTCCG CTGGGCGACA CGTTGCACCT GACCCGCCAG GTGACGGTAC AGGCCGTGCT GCTCGGCGAA GGCTTCATCA ACTGTTTCAA CCCGACTTCC GGTGTGCTGA TGGCGGTCCT CGCGACCTCC GGTGTTTCCT ACGTCAAGTG GCTGCGTTTC GTTGCGCCCC TGCTGGTCGC CTGGTTCGGC ATCTGCATCG TCGCCATTGC AGCCGGCGTC GCCATCCATT TGGGCCCCTT CTAG
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Protein sequence | MNDVSRQVES VEQRRPARAN GGREPISPYV LLFVMLVAAV IATWVVPSGE FSRTVSDGVS LVVPGSLKPV ARHGVLPGEM FVALAKGMIA SAPIIFLILF TGGALAVLEE TGAVRSALAL AAQREGARTH ITVIVLCVVF SLLGTLGVVT NSVVAFVPLG LLLAESMGLS KEMGAGLIYL STYAGFNTGI LNPVTTGLTQ RLAGLPMFSG MTFRMCIYIA FVVATIIFLV ARLRSSRVNG AAVSASTPSM GRAMPPPSPR RPDTRQLVVV GIVLVCLSVF VYGSSTRHWA ETEMIAMFLV MAIAGGIASG IRPGEIADTF LHGCSGLVKG ALVVGMARAI SIVLTDGKIL DPIVDMLAGW LAPLNSTAAA ISMFASAALI HVGISSGSGE SAVLIPIFAP LGDTLHLTRQ VTVQAVLLGE GFINCFNPTS GVLMAVLATS GVSYVKWLRF VAPLLVAWFG ICIVAIAAGV AIHLGPF
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