| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5562 |
|---|
| Symbol | |
|---|
| ID | 6182489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | + |
|---|
| Start bp | 61363 |
|---|
| End bp | 62364 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641688694 |
|---|
| Product | membrane protein-like protein |
|---|
| Protein accession | YP_001815558 |
|---|
| Protein GI | 172064846 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3781] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCTCG GCAAATCGTA CAAACTATCG GAATTTCTGA TCTGGACTCG CTGGAAGATT
TACGAGCTTC TCATTTTCGG TTCCGTGCCG GTCATCCTGT ATCAATTCTT TTCCGTCACA
TGGCTGTCGA TACCCCTGAC GATCGTGGTC CTCCTCGGAA CCGCGACGTC GTTTATCGTT
GGCTTCAAGA ACGTCCAGAC GTACAACCGG GCAATGGATG CGCTGGACAT ATGGACCGAC
ATCCATGGCA AAAGCCGTCG CTGGGGGCAA TTCACGCGCG ACTTCGTGAC GGATGAAGAG
GCTGCCAGAA AGCTGGTCTA TCGACACCTC GCCTGGTTGA CCGCGCTGCG ATACGACCTG
CGCCGTCCTC GCGTCTGGGA AAGCACGAAC AAGCGCCACA ACGCGGAGTA CCGTCGCTTC
TATCGCGTGC CGGAATGGGA AAAGGACGTC AAGGAAATAC TGCCCAAATA CTTGTCTCCT
TCTGAAGCGG AACAGGCTCT CTCGTCCGCT TCCATTACGA CATTCGTGCT GGGCCTGCAA
GGCAGTTCGC TAAAAGCACT TCACATGGCC GGCCATCTGA ATTCGAATTT CCATATGGAA
CTTCAGAAAG CCATTGGAGA CTTCATCGAT CTCCAGTCAC GATCGGAACG TTTCAAGAAT
TTCCCCTATC CGCGTCAGTA CGCGACTGTC AGTTCCCTGT TCGTCCGGTT TTTTTGCCTG
TCGCTTCCGT TCGGTCTTCT GAACGAATTC AACCGTCTGA ACGATGGCGT GAGCGGCTTC
ATGCACGGCA ATATGGTCTG GCTGGTGGTG CCATGCAGTG TCGCGGTGTC GTGGATGTAC
ACGTCGCTCG ATCAAGTTGG CGAAAGCACG GAGAATCCGT TCGAAGGCGG CGCGAACGAT
GTTCCCATTT CGACGCTGTG CGGCACGATC GAGCGAGATC TGAAAGCAAT GCTCGGAGAA
CCTGAAGCCG GTTCGTCGAG CCACGCCATC ATCGCGCTAT AG
|
|---|
| Protein sequence | MHLGKSYKLS EFLIWTRWKI YELLIFGSVP VILYQFFSVT WLSIPLTIVV LLGTATSFIV
GFKNVQTYNR AMDALDIWTD IHGKSRRWGQ FTRDFVTDEE AARKLVYRHL AWLTALRYDL
RRPRVWESTN KRHNAEYRRF YRVPEWEKDV KEILPKYLSP SEAEQALSSA SITTFVLGLQ
GSSLKALHMA GHLNSNFHME LQKAIGDFID LQSRSERFKN FPYPRQYATV SSLFVRFFCL
SLPFGLLNEF NRLNDGVSGF MHGNMVWLVV PCSVAVSWMY TSLDQVGEST ENPFEGGAND
VPISTLCGTI ERDLKAMLGE PEAGSSSHAI IAL
|
|---|
| |