| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5561 |
|---|
| Symbol | |
|---|
| ID | 6182360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 59885 |
|---|
| End bp | 61093 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641688693 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001815557 |
|---|
| Protein GI | 172064845 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAGA AAATCTTGAT AGTGGGCGCG GGCTTCGCCG GCGTGTGGGG CGCACTGAGC
GCGGCGCGCG TCCTGGATGG CGCCGGTGTG ACGAGCAGCG ACATTGAAAT TACGTTGATC
TCGCCGAAAC CGGAATTGCA GATCCGGCCG CGGTTGTACG AAAGCGAGCC GCAGCGAATG
GCTGCACCGC TTCTGCCGCT GTTCGATGCC GTCGGTGTGA AATTTCTCGA GGGTAGCGTC
GAAGAGATTG CCGTTCGGGA GAAGACGGTC AGCGTGGCTT GCTCCAACGG CCAAAAGCGT
TTGCTCGCGT ACGACAGGCT GTTGTTGACC AGCGGCAGCA AGTTGAGCAG GCCGCCGGTG
CCGGGGCTGG CGGAGCATGC GTTTTCCGTC GATCGTATCG AGGACGCGGT AGCGCTCGAT
GAGCACTTCG CGGCGCTGGC CAAACTGCCG GATTCGCCGG CACGCAATAC CGTCGCGGTA
GTTGGCTGCG GCTTTACGGG TATCGAGGTC GCCACCGAAT TGCCCGCGCG ATTGCGCGAG
AGATTAGGCA CGGATGCGAC GATTCGGGTC GTCGTGATCG GTGCGCAGGC TGAAATCGGC
CCTGATCTCG GCCCCAATCC TCGGCCTTAC GTCGCTGAAG CCTTCGACTT GCTGGGTGTC
GAGGCCGTAC TCGGATCGCG CGTCGTGTCG GTGGGGGCGG ACGGCGTTCG CACCGCGTCG
GGCACCCATA TCGAAGCCAT GACCGTGATT TGGGCGGGTG GCATGCATGC CAGTCCGCTG
ACGGCGCAAG TCTCCTCGCA TCTCGATTCG CTCGGACGCG TCGAAGTAAC GCGTGATCTT
CGTGTAGCCG AAGCGCCGCA TGTGTTCGCG GCGGGCGATG TGGCCCGAGC GCGGAGCGAC
AATGACGGGC ACCATGCATT GATGTCGTGC CAGCACGCGA TCGTAATGGG GCAATTCGGC
GGGTACAACG TCGCCGCCGA CTTGCTTGGT GCGCCGACGC TGGAATACAC GCAGCCGTTC
TATGCGACAT GCGTCGATCT TGGTGAATGG GGTGCTGTTT ATTCGGAAGG CTGGGACCGT
GAGATCAAAC TGACGCATGC CGAAGGAAAG GCGCGCAAGC AAATGATCAA CACGCAGTGG
ATCTATCCGC CAGCACCGAA TCGCGCCGAC GCACTGGCAG CAGGTAATCC GCAAGCCTCC
TTCGGCTGA
|
|---|
| Protein sequence | MSQKILIVGA GFAGVWGALS AARVLDGAGV TSSDIEITLI SPKPELQIRP RLYESEPQRM
AAPLLPLFDA VGVKFLEGSV EEIAVREKTV SVACSNGQKR LLAYDRLLLT SGSKLSRPPV
PGLAEHAFSV DRIEDAVALD EHFAALAKLP DSPARNTVAV VGCGFTGIEV ATELPARLRE
RLGTDATIRV VVIGAQAEIG PDLGPNPRPY VAEAFDLLGV EAVLGSRVVS VGADGVRTAS
GTHIEAMTVI WAGGMHASPL TAQVSSHLDS LGRVEVTRDL RVAEAPHVFA AGDVARARSD
NDGHHALMSC QHAIVMGQFG GYNVAADLLG APTLEYTQPF YATCVDLGEW GAVYSEGWDR
EIKLTHAEGK ARKQMINTQW IYPPAPNRAD ALAAGNPQAS FG
|
|---|
| |