Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5559 |
Symbol | |
ID | 6182358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 57412 |
End bp | 58908 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641688691 |
Product | transcriptional regulator |
Protein accession | YP_001815555 |
Protein GI | 172064843 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAGC AAACATCCAC GCTGACCATC GAGATCGACC GGCAAAATCA GTTGCCGATT TATCTGCAGA TTTGTGAGCG CTTCAGAACA GCGATCGCCG CGGGTCATCT GCGTCCCGGC GATCGCGTAC CCGCGCTGCG TGGTCTCGCG ACACAACTGA GCACGGCGCG CGGCACGGTC GAACAGGCTT ACACGATCCT GGTCGACGAG GGATATCTGC AAATGCGCGG CGCGGCAGGG ACATTCGTCT CGCCTTCCCT GCCGAAATCG GTGACGCGGC CGCCGCCCAA GCGCACCGAC GACTCCGCCT CGTTTCAGGC GTCGGACATG TCGCGCGACA GTCAGCCTCC ACGGCGTCCG CAGCCAATCG CCGTCGCGAT GAGCGGTGAG CCGCGTCCGT TGCAACCCGG GCTCCCCGCA TTCGACGCAT TTCCGCGCAA GGTCTGGCAC CGGCTCGTTT CCCAGCGCGC GAGCAGCGGC GAACGCGCAC TGCTGGGCTA CCCGAATCCG GCCGGTTATC GGCCGCTGCG CGAACACATT GCAACCTATC TGACGCTGTC GCGCGGCGTC ACCTGCATGC CGGAACAGGT GTTCATCACC AGCGGTTACC GCGCAACGCT GGAACTCGTA CTGCGCAGCC TCGCGCGCCC GAACGACCGT GTATGGTTCG AGGATCCCGG TTATCTGCTC GCACGCAGTT TCCTGTCAGA AACCGGAGTG CAACTCGTCC CGGTGCCGGT GGACACCGAA GGGATCGATG TCGAGCGCGG CATGCAACTG GACGCGCAGG CACGCTTCGC ACTGGTGACG CCGTCGCATC AGAGCCCACT CGGGCACACG CTATCCCTTG TCCGACGCAT CGCGCTGCTG GATTGGGCCG AAAAAAAATC GGGCTGGATC GTCGAGGACG ACTACGACAG CGAGTTTCGC TATCTCGGAC GGCCGCTGCA GGCGCTAAAG AGTCTCGATC GGTGTGATCG CGTGATCTAT TGCAGTACCT TCAGCAAGGC GATGTACCCT GGTTTAAGGC TTGCCTATAC GGTTGTGCCG GAGCGTGCGG TGGAGCGCGT CGAACGAGTG GCATGCAGCA TGAATGCCGG CTCGCCAACG CTGTTGCAGG CGGCCCTCGC GGATTTCATC GAACAGGGGC ACTTTGCCCG GCATCTGAAG CGGATGCGTA CGCTGTACGG CGAGCGGCGC ACGCTGATCG TGCGCGCATT GCGGCAGGCG TTCGGCGAGC GGCTGATCGT CGAATTGCCG CCCGGCGGCA TTCAGTTCGC GGTGCGGTTC GCAGAGGGGC CGGAAGGACC GGTCGACGAC GTCGCCGTTG CAGCGCGTGC CCGCAACGCG GGACTTGCGG TCCTGCCGCT TTCGATCTGG TATTCAAACA GTCATACGCG ACAAACGCCG CGCGGCCTCA TCATCGGATT TGCAAACATC GCCGATGCGG ACGAAGCGCA CCGTCTCGCA CAAACGCTGC GTGCATGCTT GGATTGA
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Protein sequence | MPEQTSTLTI EIDRQNQLPI YLQICERFRT AIAAGHLRPG DRVPALRGLA TQLSTARGTV EQAYTILVDE GYLQMRGAAG TFVSPSLPKS VTRPPPKRTD DSASFQASDM SRDSQPPRRP QPIAVAMSGE PRPLQPGLPA FDAFPRKVWH RLVSQRASSG ERALLGYPNP AGYRPLREHI ATYLTLSRGV TCMPEQVFIT SGYRATLELV LRSLARPNDR VWFEDPGYLL ARSFLSETGV QLVPVPVDTE GIDVERGMQL DAQARFALVT PSHQSPLGHT LSLVRRIALL DWAEKKSGWI VEDDYDSEFR YLGRPLQALK SLDRCDRVIY CSTFSKAMYP GLRLAYTVVP ERAVERVERV ACSMNAGSPT LLQAALADFI EQGHFARHLK RMRTLYGERR TLIVRALRQA FGERLIVELP PGGIQFAVRF AEGPEGPVDD VAVAARARNA GLAVLPLSIW YSNSHTRQTP RGLIIGFANI ADADEAHRLA QTLRACLD
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