Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5558 |
Symbol | |
ID | 6182357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 56473 |
End bp | 57216 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641688690 |
Product | NmrA family protein |
Protein accession | YP_001815554 |
Protein GI | 172064842 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCG TTGTCATCGG CGGTTCGGGC CTGATCGGCT CGCGTGTCGT CACGTTGCTC GGCGAAGCGG GCCATCAGGC GCTTGCGGCA TCTCCGCGCA CCGGCGTCAA CACCATCACG GGCGAAGGCC TGACCGACGC GTTGACGGAG GCGGATGTTG TCGTGGATGT GGCGAATGCG CCGTCATGGG AGCCGCAGGC GGTGCTGGAC TTCTTCCGCA CGTCGGCACG CAATCTCGGC AAGGCGGAAG TGGCCGCCGG CGTGCGCCAT CACGTCGCGC TGTCGATCGT CGGCTGCGAC CGCATGCCGG AGAACGGCTA TTTCGCGGCG AAGGTCGCGC AGGAACAGGC GATCGAAGCA GCGGGCGTTC CGTACACCAT CGTTCGCGCG ACGCAATTCA TGGAATTCAT CGGCGGCATC GCGGATGCCG GCGCGGAAGA CGGCACGGTC CACATCGGCG ACGGGCTGTT TCAGCCGATC GCCGCGGAAG ACGTGTCGGC ATTCGTCGCG CAGACCGCGC TCGCCGCGCC GCAGAACGGC ACGATCGAGA TCGCGGGCCC GGATCGCGCG CCGTTCGCGG AGATCGTCGC GCGCTATCTG AAGTCGGTCG GCGACACGCG CGCGGTGGTG ACCGATCGCG ACGCCCGCTA CTACGGCGGC CGCGTCGAGG AGAAATCGCT GGTGCCGCTC GGCCCTGCGC GACTCGGCCG CATCAGCCTC GACCAGTGGC TCGCAAGAAA CTGA
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Protein sequence | MKIVVIGGSG LIGSRVVTLL GEAGHQALAA SPRTGVNTIT GEGLTDALTE ADVVVDVANA PSWEPQAVLD FFRTSARNLG KAEVAAGVRH HVALSIVGCD RMPENGYFAA KVAQEQAIEA AGVPYTIVRA TQFMEFIGGI ADAGAEDGTV HIGDGLFQPI AAEDVSAFVA QTALAAPQNG TIEIAGPDRA PFAEIVARYL KSVGDTRAVV TDRDARYYGG RVEEKSLVPL GPARLGRISL DQWLARN
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