Gene BamMC406_5558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5558 
Symbol 
ID6182357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp56473 
End bp57216 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content68% 
IMG OID641688690 
ProductNmrA family protein 
Protein accessionYP_001815554 
Protein GI172064842 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG TTGTCATCGG CGGTTCGGGC CTGATCGGCT CGCGTGTCGT CACGTTGCTC 
GGCGAAGCGG GCCATCAGGC GCTTGCGGCA TCTCCGCGCA CCGGCGTCAA CACCATCACG
GGCGAAGGCC TGACCGACGC GTTGACGGAG GCGGATGTTG TCGTGGATGT GGCGAATGCG
CCGTCATGGG AGCCGCAGGC GGTGCTGGAC TTCTTCCGCA CGTCGGCACG CAATCTCGGC
AAGGCGGAAG TGGCCGCCGG CGTGCGCCAT CACGTCGCGC TGTCGATCGT CGGCTGCGAC
CGCATGCCGG AGAACGGCTA TTTCGCGGCG AAGGTCGCGC AGGAACAGGC GATCGAAGCA
GCGGGCGTTC CGTACACCAT CGTTCGCGCG ACGCAATTCA TGGAATTCAT CGGCGGCATC
GCGGATGCCG GCGCGGAAGA CGGCACGGTC CACATCGGCG ACGGGCTGTT TCAGCCGATC
GCCGCGGAAG ACGTGTCGGC ATTCGTCGCG CAGACCGCGC TCGCCGCGCC GCAGAACGGC
ACGATCGAGA TCGCGGGCCC GGATCGCGCG CCGTTCGCGG AGATCGTCGC GCGCTATCTG
AAGTCGGTCG GCGACACGCG CGCGGTGGTG ACCGATCGCG ACGCCCGCTA CTACGGCGGC
CGCGTCGAGG AGAAATCGCT GGTGCCGCTC GGCCCTGCGC GACTCGGCCG CATCAGCCTC
GACCAGTGGC TCGCAAGAAA CTGA
 
Protein sequence
MKIVVIGGSG LIGSRVVTLL GEAGHQALAA SPRTGVNTIT GEGLTDALTE ADVVVDVANA 
PSWEPQAVLD FFRTSARNLG KAEVAAGVRH HVALSIVGCD RMPENGYFAA KVAQEQAIEA
AGVPYTIVRA TQFMEFIGGI ADAGAEDGTV HIGDGLFQPI AAEDVSAFVA QTALAAPQNG
TIEIAGPDRA PFAEIVARYL KSVGDTRAVV TDRDARYYGG RVEEKSLVPL GPARLGRISL
DQWLARN