| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5552 |
|---|
| Symbol | |
|---|
| ID | 6182351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 48830 |
|---|
| End bp | 50278 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641688684 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001815548 |
|---|
| Protein GI | 172064836 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.789613 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAGA ATCAAGCGCG CCCGGTCCGC TTCCTAAGTG AACAGGACTA CGAACAGTTT
GTCCCGGTTC ACGTCGTGTG GGAAATCACG CTGGCTTGCG ACCTGAAGTG CCTGCACTGT
GGATCGCGTG CGGGCCACAG ACGCACCCAC GAACTGTCGA CCGGCGAGTG TCTCGAGGTG
ATCGACGCGC TGGCCAGGCT CGGTACGCGA GAAGTGTCGA TGATCGGAGG TGAGGCTTAC
CTCCGCAAGG ACTGGGCGCA GCTCATCAAG GCAATCCGCT CGCACGGGAT GTACTGCGCG
GTGCAGACAG GTGGCCGCAA TCTGACACCT GCCCGGCTCG CGCAGGCAGT CGAAGCGGGC
CTCAACGGAC TCGGGGTGTC GCTTGACGGC CTGGCGCCGT TGCATGACAA GGTACGCAAC
GTTCCGGGAT CGTTCGATCG GGCCGTGGAT ACGCTGAAGC GCGCCCGCGC GCACGGTCTC
GCGATCAGTG TGAACACGCA GATCGGCTCG GCAACGATGC GCGATCTCCC GGCGTTGATG
GATTCGATCA TCGAGATCGG GGCGACACAC TGGCAGATTC AGTTGACGGT CGCGATGGGG
AACGCCGTCG ATCACGACGA ATTGCTCCTG CAGCCGTACC AGCTCGAGGA GTTGATGCCG
CTGCTCGCCG ATCTCTACAA GCGGGGGCTT GATCGCGGCC TGCTGATGAA TGTCGGCAAC
AACATCGGCT ACTTCGGACC TCACGAGCAT CTGTGGCGCG GCTTCGGGGA CGAGCGGGTG
CACTGGACCG GATGCGCAGC CGGGCAGACC GTCATCGCGC TCGAAGCGGA CGGCACCGTC
AAGGGGTGCC CGTCGCTCGC GACGGTCGGT TTCGCGGGCG GCAACGTTCG GGATCTGTCT
CTGGAGGAAA TCTGGCGCAC GAGCGAGGCG ATCCATTTCG GCCGACTGCG CTCGGTGGAC
GACCTGTGGG GATTCTGTCG CACGTGTTAC TACGCCGATG TGTGTCGTGG CGGCTGTACG
TGGACCTCGC ATTCGCTGCT CGGCAAGCCG GGCAACAATC CTTATTGCCA CTATCGCGTG
CTCGAATTGA AGAAGCAGGG GCTGCGCGAG CGCATCGAGA AGATCGAGGA TGCGGCGCCT
GCGTCGTTCG CGGTGGGTCG CTTCGATCTG GTCACCGAAC GCATTTCGGA CGGCACACCC
GTATCGAGCA TTTCCCGCTC GGGACGGACC GTCGAACTCG CGTGGAAACA CAAGGGCAAG
GGTGCGCCGG AGGTCGGCAG AGTCCCGCCG AGGCTGGTCG TCTGCCGCGC CTGTAACAGC
TACGTCCATC AGCACGAGTC GCGGTGCCCG CACTGCGGGG CAGACATCGC GGCTGCGGAG
CGTGCTTACG AACACGACGT GCAGCGTCGT CATGCACTGA TTCAGGAAGT GGAGCGACTG
TTGAGTTGA
|
|---|
| Protein sequence | MDENQARPVR FLSEQDYEQF VPVHVVWEIT LACDLKCLHC GSRAGHRRTH ELSTGECLEV
IDALARLGTR EVSMIGGEAY LRKDWAQLIK AIRSHGMYCA VQTGGRNLTP ARLAQAVEAG
LNGLGVSLDG LAPLHDKVRN VPGSFDRAVD TLKRARAHGL AISVNTQIGS ATMRDLPALM
DSIIEIGATH WQIQLTVAMG NAVDHDELLL QPYQLEELMP LLADLYKRGL DRGLLMNVGN
NIGYFGPHEH LWRGFGDERV HWTGCAAGQT VIALEADGTV KGCPSLATVG FAGGNVRDLS
LEEIWRTSEA IHFGRLRSVD DLWGFCRTCY YADVCRGGCT WTSHSLLGKP GNNPYCHYRV
LELKKQGLRE RIEKIEDAAP ASFAVGRFDL VTERISDGTP VSSISRSGRT VELAWKHKGK
GAPEVGRVPP RLVVCRACNS YVHQHESRCP HCGADIAAAE RAYEHDVQRR HALIQEVERL
LS
|
|---|
| |