Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5546 |
Symbol | |
ID | 6182345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 41353 |
End bp | 42474 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641688678 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001815542 |
Protein GI | 172064830 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.883146 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCGC AAGCCCCGAC AGTCCGCGCC GGGCCGCTCA AGTACAATGC GAGCGGTTCG ACCGACGGGG ACGCGATGAC CGGTTCAGAC TCACCTTCCG CCCAGCCCGG GCGTGCGCTG CCGTCGCCGA GCGCGACGGT GCCGATCTCG CTCGTCAACG GTTTTCTGGC GAGCGCGGGC GCGCAGCGCG ACGTGGTCGA GCGCTACCTG CGCGGGGCCG GCATCCCGCT CGAGCTGCTC GGCGAGCCGC ATGCGCGCGT GACGGAAGAG CAGTTCTCGA CGCTGTACCG CACGCTCGCG ATCGATCTCG ACGACGAGAT GCCGGGCATC TTCTCGCGCC CGTTGCGCGG CGGCACGCTG AAGTACCTGT GCCTGAGCCT GCTCGATGCG CGCAACCTCG AAACGGCGCT GCATCGTTTC GGCCAGTTCT TCCATATCCT GCTCGACGAC TTCTTCGTAG ACTCGAAGCG CGACGGCCTG GTCGCGCAGG TGCTGCTGCG ACCGAACCCG GCCATCGGCC CGATCGGCGC GCTCGGCCAG GAGCTGATGC TCAAGCTCGT GCACGGCGTG TGTTCCTGGC TGATCGGGCA GAAGATCCCG CTGCTGCGGA TCGAGCTCGC GTGTCCGCGG CCGCGCCATG CGGTCGAACA CCTGTACTTC TTCTCCGGCT CCGTGCAATT CGACTGCGAA CGCACGCTGA TGCGCTTCAG CGCCGACTAC CTCGACGCGC CGATCCGGCA GAGCAAGCGC AACCTGCGCA AGTTCCTCGC GCGCGCGCCG GGCGACTGGA TCTTCGAATC GTTCAGCGAG CAGCTCGTGT GCCATCGCGT GCGGCAATAC CTGTCGGCGG CGCTGCCCGA CCTGCCGGTG ATCGACGAGG CGGCCGAGCA TCTGCATTGC TCGGTGCGCA CGCTGAGCCG CCACCTCGCC GCCGAAGGCA CGACATTCCA GGCGCTCAAG GACGAACTGC GGCGCGACAT CGCGATCCAG CGGCTCACCG ACACGCTCGA CACGATCGCG GCGATCGGCG CCGATATCGG CTTCGACGAT CCCAGCGCGT TTCATCGCGC ATTCCGGCAC TGGACGGGGA GTACGCCGGG GACTTACCGG CGGCGCGCGT AG
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Protein sequence | MPAQAPTVRA GPLKYNASGS TDGDAMTGSD SPSAQPGRAL PSPSATVPIS LVNGFLASAG AQRDVVERYL RGAGIPLELL GEPHARVTEE QFSTLYRTLA IDLDDEMPGI FSRPLRGGTL KYLCLSLLDA RNLETALHRF GQFFHILLDD FFVDSKRDGL VAQVLLRPNP AIGPIGALGQ ELMLKLVHGV CSWLIGQKIP LLRIELACPR PRHAVEHLYF FSGSVQFDCE RTLMRFSADY LDAPIRQSKR NLRKFLARAP GDWIFESFSE QLVCHRVRQY LSAALPDLPV IDEAAEHLHC SVRTLSRHLA AEGTTFQALK DELRRDIAIQ RLTDTLDTIA AIGADIGFDD PSAFHRAFRH WTGSTPGTYR RRA
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