| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5542 |
|---|
| Symbol | pntA |
|---|
| ID | 6182341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | + |
|---|
| Start bp | 36988 |
|---|
| End bp | 38589 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641688674 |
|---|
| Product | NAD(P) transhydrogenase subunit alpha |
|---|
| Protein accession | YP_001815538 |
|---|
| Protein GI | 172064826 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
|---|
| TIGRFAM ID | [TIGR00561] NAD(P) transhydrogenase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTAC AGATTGGGAT TCCTCTGGAG ACAGCCACCG GCGAACGGCG CGTTGCGACC
GTACCCGAAG TGGTCGAGAA ACTGATCAAG CTGGGGTTTT CGGTGGCCGT GCAAAGCGGC
GCCGGCGCCG GCGCGAATTT TGACGACGAT GCGTATCGCG CGGCCGGCGC GAGCATCGCC
GCGTCGGCGG CGGAGCTATG GTCCGGCAGC GACATCGTGT TCAAGGTGCG CCCGCCGAGT
GCCGACGAAG TCGCGCTGAT GCGCGAGGGC GGCACGCTGA TCGGCTTCGT GTGGCCCGCG
CAGAACCCCG AACTGATGCA GCAGCTGGCC GCGAAACGCG CGACGGTGCT CGCGATCGAT
TCGCTGCCGC GCACGCTGTC GCGCGCGCAG AAGATGGACG CGCTGACGTC GATGGCCGGC
ATCAGCGGCT ACCGCGCGGT GATCGAGGCC GCGCATGCGT TCGGCCGCTT CCTGAACGGC
CAGGTCACGG CGGCCGGCAA GGTCCCGCCG GCCAAGGTCT TCATCGCCGG CGCCGGCGTC
GCGGGCCTCG CCGCGATCGG CACGGCCGCG AGCCTCGGCG CGATCGTGCG CGCGAACGAC
ACGCGCGCCG AGGTGGCCGA TCAGGTCAAG TCGCTGGGCG GCGAGTTCGT CAAGGTCGAC
TACGAAGAGG AAGGCTCGGG CGGCGGCGGT TACGCGAAGG TGATGAGCGA AGGCTTCCAG
CAGGCGCAGC GCGCGATGTA TGCGCAGCAG GCCAGGGACG CCGACATCAT CATCACGACC
GCGCTGATCC CCGGCAAGCC GGCGCCGAAG CTGATCACCG CCGAGATGGT GCAGTCGATG
AAGCCCGGCA GCGTGATCGT CGACATGGCC GCCGAACAGG GCGGCAACTG CGAACTCACG
GTGCCCGGCG AGGCGGTCGT GCGCCACGGC GTGACCATCG TCGGCTATAC CGATCTCGCG
TCGCGCCTGT CGCGCCAGGC GTCCACGCTG TACGGCACCA ACCTGCTGCG CGTGATCGAG
GAGCTGTGCA AGGGCAAGGA CGGCACGATC AACGTCGACT TCGACGACGA CGCGATCCGC
GGCCTCACCG TCATCAAGGA AGGCAACATC ACGTGGCCGC CGCCGCCGAT CAAGCAGGCG
GTCGTCGCAC CCAAGCCGCA GGCTGCCGCA CCCGCCGCGG CCGCGCCGGC GAAATCCAAG
GGCCACGGTC ACAGCGGCGA GCCGATGTCG GCCAAGGCGC TCGCGATCGT GTTCGCGATC
GGCGCACTGG CGTTCCTGCT GGTCGGCCAG TTCGCGCCGG CCAGCTTCCT GTCGCACTTC
ACGGTGTTCG TGCTCGCGTG CTTCGTCGGC TACATGGTGA TCTGGAACGT CACGCCGTCG
CTGCACACGC CGCTGATGAG CGTGACCAAC GCGATCTCGT CGATCATCGC GATCGGCGCG
CTGGTGCAGG TCGCGCCGCC GCTGGGCGAG CTGGCCAATG CCGGCGACCG CCCGTCCGGG
CTGATCCTCG GTCTCGCGGT GGGCGCGCTG ACGCTCACGG CCGTCAACAT GTTCGGCGGC
TTCGCGGTGA CGCGTCGCAT GCTGGCGATG TTCCGCAAAT AA
|
|---|
| Protein sequence | MTLQIGIPLE TATGERRVAT VPEVVEKLIK LGFSVAVQSG AGAGANFDDD AYRAAGASIA
ASAAELWSGS DIVFKVRPPS ADEVALMREG GTLIGFVWPA QNPELMQQLA AKRATVLAID
SLPRTLSRAQ KMDALTSMAG ISGYRAVIEA AHAFGRFLNG QVTAAGKVPP AKVFIAGAGV
AGLAAIGTAA SLGAIVRAND TRAEVADQVK SLGGEFVKVD YEEEGSGGGG YAKVMSEGFQ
QAQRAMYAQQ ARDADIIITT ALIPGKPAPK LITAEMVQSM KPGSVIVDMA AEQGGNCELT
VPGEAVVRHG VTIVGYTDLA SRLSRQASTL YGTNLLRVIE ELCKGKDGTI NVDFDDDAIR
GLTVIKEGNI TWPPPPIKQA VVAPKPQAAA PAAAAPAKSK GHGHSGEPMS AKALAIVFAI
GALAFLLVGQ FAPASFLSHF TVFVLACFVG YMVIWNVTPS LHTPLMSVTN AISSIIAIGA
LVQVAPPLGE LANAGDRPSG LILGLAVGAL TLTAVNMFGG FAVTRRMLAM FRK
|
|---|
| |