Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5537 |
Symbol | |
ID | 6181992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 32271 |
End bp | 32867 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641688669 |
Product | NADP oxidoreductase coenzyme F420-dependent |
Protein accession | YP_001815533 |
Protein GI | 172064821 |
COG category | [R] General function prediction only |
COG ID | [COG2085] Predicted dinucleotide-binding enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.115181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTTACG CAATCATTGG CTTCGGCAAG ATCGGCCACG CACTTGCCAG GGCGTTCGCC CGCAACGGCA TCGAAGTGGC CGTTGCAACC ACGCGCGACC CGGAAAGCTT CGCGGCCGAT GCGGCAGCGA TCGGCCCCAC GATCATTCCC AAAACCCTGG CGGAAGCCGT CAGGGCGGAC ATCATCTTTC TGGCTGTCCG TTTCGAGTCG CACCCGGAGG TTGCAAAAGC GCTGCGCGAC TGGAAGGGGA AGACCGTCGT CGACGCGATG AACACGCAGG CCCCGCTCGA GGAACTGGGC GGTCTCCCGT CCTCTGTTTT CGTCGCGAAC GCGTTCAGCG GAGCCCGGCT GGTGAAAGGC TTCAATCATC TGGTGGCCGC CGTCCTCGGC CAGGACCCGG CCATACATGG GGGCAGGAGA GTCGTGTTCC TCGCGAGCGA CGATGACGGC GCCGCAGCGG AGATCGGCGC GCTTGCCGAA AAACTCGGTT TCGCGCCAAT CAAACTGGGT GGGCTTTCGG ACGGTGGCCT GCTCGTGCAC GCACGCGGAA ATCAGTGGGG ACAACTGATC TTCAAGGACC TGATCACGTT CGACTGA
|
Protein sequence | MRYAIIGFGK IGHALARAFA RNGIEVAVAT TRDPESFAAD AAAIGPTIIP KTLAEAVRAD IIFLAVRFES HPEVAKALRD WKGKTVVDAM NTQAPLEELG GLPSSVFVAN AFSGARLVKG FNHLVAAVLG QDPAIHGGRR VVFLASDDDG AAAEIGALAE KLGFAPIKLG GLSDGGLLVH ARGNQWGQLI FKDLITFD
|
| |