| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5535 |
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| Symbol | |
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| ID | 6181990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 30647 |
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| End bp | 31411 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641688667 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001815531 |
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| Protein GI | 172064819 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGCA AACTCGACAA CAAGATCGCA CTCGTCACCG GCGCAACCAG CGGCATCGGT
CTTGCCACGG CCCAACGTTT CGCGGCCGAA GGGGCGCACG TTTATCTCAC GGGCCGGCGC
CCGGCCGAAC TCGATGCCGC CGTGACCGGC ATTGTCGAAG CCGGCGGAAA GGCGACCGGC
GTACGGTCGG ATTCCACCCG GCTCGATGAG CTCGACGCGC TGTATGAGCA AATCAAGAAG
GAGCACGGAC GCCTGGACGT GCTGTTCGTG AACGCCGGCG GCGGTTCGAT GCTGCCGCTT
GGCAGCATTA CCGAGGCACA CTACGACGAA ACCTTCGACC GCAACGTGAA GGGCGTGCTG
TTCACGGTGC AGAAGGCACT GCCGCTGCTC GCCGATGGCG CGTCGGTGAT TCTGACCGGC
TCGACCGCGG GAAGCGCGGG TACCGCTGCG TTCAGCGTGT ATTCGGCTTC GAAGGCGGCA
GTGCGGGCCT TCGCACGCAG CTGGATTCTC GACCTCAAGG AGCGCCATGT CCGCGTGAAC
ACGATCAGCC CGGGCGCGAC GCGCACGCCC GGTCTGCTCG ATCTCGCCGG TGACGATGCG
ACTCAGCGTC AGGGGCTGGC CGATTACCTG GCTGCCCAGA TCCCGATGGG GCGCCTTGGC
GAGCCGGGCG AGATCGCGAG CGCGGCGCTG TTCCTGGCCT CGGACGACGC GAGCTTCGTG
AACGGCATCG AATTGTTTGT CGATGGCGGC CAGCAACAGA TCTGA
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| Protein sequence | MARKLDNKIA LVTGATSGIG LATAQRFAAE GAHVYLTGRR PAELDAAVTG IVEAGGKATG
VRSDSTRLDE LDALYEQIKK EHGRLDVLFV NAGGGSMLPL GSITEAHYDE TFDRNVKGVL
FTVQKALPLL ADGASVILTG STAGSAGTAA FSVYSASKAA VRAFARSWIL DLKERHVRVN
TISPGATRTP GLLDLAGDDA TQRQGLADYL AAQIPMGRLG EPGEIASAAL FLASDDASFV
NGIELFVDGG QQQI
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