Gene BamMC406_5524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5524 
Symbol 
ID6181979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp13335 
End bp14222 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content67% 
IMG OID641688656 
Producthypothetical protein 
Protein accessionYP_001815520 
Protein GI172064808 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTC TCGGAGCCGC TGTGGCCATC CCGGACTCGG CGACCACGGC GCAATCCTGC 
GCCAACGATT ACGCGATCAA GGCAGCCAGG CAGGCGCTGC TGCAAGCCGG TTGCCTGCCG
TCGGAACTGG ATCTGATCGT CAGCCTGTCG ATTTCTCCCA GCCGGATGGC GGACGCACCG
ACGATCGCCG GGCCGCGGCT CGCGCACCCG GTGCAGCGCG ACCTGCGTGC GCGACATGCG
GCCGTGTTCG ATCTGCTCGA CGCGGACTGG ACGCTCGCAC TCGATCTCGC GCAAAGCCAT
TGCAAACAGC TCGGCTATCG ACGCGCGCTC GTCGTTCGCG CGGAGGCGCT CGCGGACGTC
GAACAGGTGG CCACGAGCGG CTTCGCCGAC GGCGCGGGGG CGATCGTCCT GACGCCTGCC
GGCCATGACC GAGTTTATGC CAGCCGCTAC GCTGACCTCG AGTCGCCCCC GTTCGCGACG
CTCGACGCGC TTCCCGCCCG GCGCGTGAAC GGCATCCTGT CACTGGCCCG CTTCGAGAGC
CGGTTCGATC ACGCAGCCGG TCGATTCGAC GCCGAACCGG CCAATGCGGC CACCGCGCTG
CGCGCGATGG TCGACGCGGT GCAGAGCCGC ATCGACCGGC GCGTCGCCAC GCTGTTTTGC
GAATCCTGGT TGAGTGGATG GCCATCGATC GTCACCGGCG TGGGTCGCGA TTTCCACGTC
GATGTCGTCT CCGGTTCGAC GGACATCCCG AACCCGTTCC AGTTGCCCGC GTGGCTCGCG
TCCCGCGTCG CACATTCGAG GTCGTTGCGT GACGATGAAC ATACGGTGGT CGCCATGACG
CTGGATCCGT TCAGGCCGCG CATCGCCTGC AGCACGATGG AGATCTGA
 
Protein sequence
MKILGAAVAI PDSATTAQSC ANDYAIKAAR QALLQAGCLP SELDLIVSLS ISPSRMADAP 
TIAGPRLAHP VQRDLRARHA AVFDLLDADW TLALDLAQSH CKQLGYRRAL VVRAEALADV
EQVATSGFAD GAGAIVLTPA GHDRVYASRY ADLESPPFAT LDALPARRVN GILSLARFES
RFDHAAGRFD AEPANAATAL RAMVDAVQSR IDRRVATLFC ESWLSGWPSI VTGVGRDFHV
DVVSGSTDIP NPFQLPAWLA SRVAHSRSLR DDEHTVVAMT LDPFRPRIAC STMEI