| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6787 |
|---|
| Symbol | |
|---|
| ID | 6181739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010553 |
|---|
| Strand | - |
|---|
| Start bp | 289569 |
|---|
| End bp | 290090 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641685531 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001812436 |
|---|
| Protein GI | 172064786 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.404455 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.840154 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGGCC TTTATCCCGC CGGTGCCCGT TGGGTCCAGC AGTTCTCCGC GTCGAACGAC
GCAAAGACGT TGCAGAAGAG TCTCGTTGAC CACGGCGGAT GCACGGCCGC GCTGTTTCAT
CAGCCCTTCG GCGCCGGTCG CGGCGTCACG ATTGCGCAGC GCGACAGTTT CCTCGTGCTC
GTGCATGCGA CCGACGTCGA TTCTCCGGAA GTCGCTGTCG TGCCCGACGT TCAGATGCAG
AACCTGCTTT GGTCGTTCAA TTCGGGATAC GCCAGTCAGT GGTCGGGGCG CGAGCTCCAG
GTCCTGACCG GCTGTACCGA TTGGGATGCG CTGATCAAGC AGGCGTCCGC GTCGTTCGCG
CAACTTTGCG ACACGGTTCG GCAAGCCGTG GCAGGCACGC TTGGCACCAA GGTCATCCGG
CCGGAGCCAA TGCTGCCGCT CGACGACGAG GACATTCCGT TCCTGCCGTC GGAATACCTG
CAGGAGATCT CTTTTTTGGA GGCGGAATCA TGCGTCCGTT GA
|
|---|
| Protein sequence | MFGLYPAGAR WVQQFSASND AKTLQKSLVD HGGCTAALFH QPFGAGRGVT IAQRDSFLVL
VHATDVDSPE VAVVPDVQMQ NLLWSFNSGY ASQWSGRELQ VLTGCTDWDA LIKQASASFA
QLCDTVRQAV AGTLGTKVIR PEPMLPLDDE DIPFLPSEYL QEISFLEAES CVR
|
|---|
| |