| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6783 |
|---|
| Symbol | |
|---|
| ID | 6181735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010553 |
|---|
| Strand | - |
|---|
| Start bp | 286154 |
|---|
| End bp | 286714 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641685527 |
|---|
| Product | putative endonuclease |
|---|
| Protein accession | YP_001812432 |
|---|
| Protein GI | 172064782 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.023889 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC AGATCCTGTT TGCCACGACA GTGGCGTTGT TGTTTTGTTT CGCCGCGGTT
GCGTTTGCGG GGCGTGCACA CGCGGAACCC GTGCCCGCGG TCGATGTGGC GTTCTCGCCG
AACGGCGACG CCGAGCAGTT GGTCATTCGG ACGATCGATT CGGCGCAGCG GTCGATTCGC
GTGATGGCGT ATTCGTTCAC GTCGCCGGCC ATTGTCCGTG CGCTGATCGC GGCGCAACGC
CGCGGCGTCG CCGTCGCCGT GACAGTGGAC TATCGCAACA ATCTCGAGGA GGACCGCAGC
GGCCGCGCTC GTGCCGCACT TGGGAGTCTC GCCTATGCGG GCATCCCGGT GCGCGTCGTG
AGCGTCTATC CGATCCAGCA CTCCAAATAT CTTGTCGTCG ATGGAGCGAC GGTCGAGACT
GGCAGCTACA ACTATTCGCA TGCAGCCCGG TATAACGCCG AGAACGTCGT CGTGTTACGT
GGCGACGAAC GTGTCGCAGA TGCGTACCTG AAGAACTGGG AAGCGGTGTC CGCGCGCGGC
GAACTGTATC GGGCGCCCTG A
|
|---|
| Protein sequence | MKKQILFATT VALLFCFAAV AFAGRAHAEP VPAVDVAFSP NGDAEQLVIR TIDSAQRSIR
VMAYSFTSPA IVRALIAAQR RGVAVAVTVD YRNNLEEDRS GRARAALGSL AYAGIPVRVV
SVYPIQHSKY LVVDGATVET GSYNYSHAAR YNAENVVVLR GDERVADAYL KNWEAVSARG
ELYRAP
|
|---|
| |