| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6772 |
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| Symbol | |
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| ID | 6181695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | - |
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| Start bp | 269193 |
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| End bp | 271331 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641685518 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_001812423 |
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| Protein GI | 172064773 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCGTGA CTGCACGACC CGAAAACTTC GCCGCGGACC CAGGGCTCGG AGCGCTGGTG
CTCATCGCGC GCGTTCATGG TATTGCCGCA GACGCTGCGC AGCTCCATCA TGCGGCGGCC
CTCAAGAACG ACAGGTTTGA AGAAGGCGAT TTGATCCGGG CAGGTCGTTC ACTTGGTCTC
AAGGTACGTG CGGTCACAGT GACCGAGGAT CGCCTCCCGA ACCTGCCGAT GCCGGCGCTT
CTCCTCGACA ATAATGGCGA GCACTGTGTC CTGGCGGGAT GTGATCGGTC ACGAGCCTTA
ATCCTCGAGT GCGGTGCGAC TGCCCCGACG GTCTCCACGC CAGCCGAAGC CGTGTCAAGA
TCGAGCGGCA GAATCTTGCT TTTCGCATCC AGGGCGTCGC TTTCCGGCGA TCTCGCACGA
TTCGACTTTT CGTGGTTTAT TCCAGCCGTC GTCAAGTATC GACGCCTGCT GCTCGAAGTG
TTGGCGGTAT CGCTCATACT GCAAGCGTTC GGCCTCGTCT CGCCCCTGAT GTTCCAGGTG
GTCATGGACA AGGTTCTAGT CAATCGAGCC TATTCGACGC TGAACATTGT CTCTCTCGCT
CTCCTCGCGA GCGCGATCTT TGAGGTCCTC CTGACGGGGC TGCGAAACTA TGTTTTTGCG
CATACAACCA ATCGCATCGA CGTAGAGTTG GGCGCAAAGC TCTTTCGTCA CCTCGTGACG
CTTCCGCTCG CCTACTTCGA GGCGAGACGC GTCGGCGATA CGGTGGCCCG GGTTAGAGAA
CTCGAGAACA TTCGGAACTT TCTGACAGGG CAAGCGCTGA CTGCAGCAAT CGATCTGGTT
TTCTCGATCG TATTTCTTGG TGTGATGTGC CTGTACAGCG TTTGGTTGAC CTTGATTGTT
GCCATCTCGC TGCCTGTCTA CGCGGGGATC TCAATGTTGC TGAATCCCAT CCTCCGCGAG
CGCCTGAATC AGAAGTTCGG CCGCGGCGCC GACAACCAGT CCTTTCTCGT AGAAGCGATA
TCCGGCGTCC AAACCGTGAA GGCGATGGCA CTGGAACCGC AATTCACACG CCGTTGGGAC
AATCAGCTTG CTGCTTACGT CACCGCAAGC TTCCGCGTGA ACGCGTTGAG CAACGTAGGC
CAGCAGCTGA TTCAATTGGT CGGCAAGTTG GTTACTGTTG CGACGTTGTT TCTCGGTGCA
AAGCTCGTGA TCGACGGCAG ATTGACTGTC GGCGAGCTGG TTGCATTCAA CATGATGTCG
CAACGCGTTG CAGCACCCGT ACTTCGATTG GCTCAACTGT GGCAGGATTT TCAACAGATC
GGCATCTCAA TGATGCGCTT GGGTGACATC CTCAATTCGC GCACCGAACT ACCCCAAAGT
CGCCAGGCGA TGCCCGCAAT TCGAGGCGAC GTTCAGTTTT CTGACATCCG ATTTAGGTAC
CGCCCCGACG GACAACCCGT ACTCAATGGA GTGAGTCTTG TGATCCGCGC CGGGGAACTC
ATCGGAATTG TGGGTCGATC TGGCTCGGGA AAGAGCACGC TGACTAAACT GCTGCAACGG
CTCTATGTGC CTGAGCACGG ACGCATAACG ATCGACGGAC ATGATCTTGC GTTAGCCGAT
CCGGCATGGT TGCGTCGTCA GATTGGCGTC GTGCTTCAAG AGAACTTCCT CTTTAATCGG
TCCATTCGCG ACAACATTGC GGCGACCGAT CCGGGCGCGT CCTTGGACAC TGTGATTCAA
GCGGCGAAAC TCGCCGGCGC GCACGAGTTC ATCAGCGAGT TTCCGGAGGG GTACGACACA
ACGGTGGGTG AACATGGCTC AACGCTTTCG GGTGGCCAGC GGCAGCGCAT CGCTATCGCG
CGCGCCCTCT TGACCAATCC CAGGATCTTG ATCTTTGACG AGGCGACCAG TGCACTCGAC
TTCGAGACCG AACGGGTTAT CCAAAATAAC ATGCAGGCGA TATGCCGCGG TCGTACGGTG
ATCGTCATCG CACATCGACT GAGCGCCGTA CGTCACGCAC ATCGTATCGT CGCGATGGAT
AAGGGCCTCA TCGTGGAGCA CGGCAGTCAC GACGAACTGA TGACTGTCGG CGGTTACTAC
GCGCACTTAG TATCCTTGCA GGACCGGCAG CCGATATGA
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| Protein sequence | MLVTARPENF AADPGLGALV LIARVHGIAA DAAQLHHAAA LKNDRFEEGD LIRAGRSLGL
KVRAVTVTED RLPNLPMPAL LLDNNGEHCV LAGCDRSRAL ILECGATAPT VSTPAEAVSR
SSGRILLFAS RASLSGDLAR FDFSWFIPAV VKYRRLLLEV LAVSLILQAF GLVSPLMFQV
VMDKVLVNRA YSTLNIVSLA LLASAIFEVL LTGLRNYVFA HTTNRIDVEL GAKLFRHLVT
LPLAYFEARR VGDTVARVRE LENIRNFLTG QALTAAIDLV FSIVFLGVMC LYSVWLTLIV
AISLPVYAGI SMLLNPILRE RLNQKFGRGA DNQSFLVEAI SGVQTVKAMA LEPQFTRRWD
NQLAAYVTAS FRVNALSNVG QQLIQLVGKL VTVATLFLGA KLVIDGRLTV GELVAFNMMS
QRVAAPVLRL AQLWQDFQQI GISMMRLGDI LNSRTELPQS RQAMPAIRGD VQFSDIRFRY
RPDGQPVLNG VSLVIRAGEL IGIVGRSGSG KSTLTKLLQR LYVPEHGRIT IDGHDLALAD
PAWLRRQIGV VLQENFLFNR SIRDNIAATD PGASLDTVIQ AAKLAGAHEF ISEFPEGYDT
TVGEHGSTLS GGQRQRIAIA RALLTNPRIL IFDEATSALD FETERVIQNN MQAICRGRTV
IVIAHRLSAV RHAHRIVAMD KGLIVEHGSH DELMTVGGYY AHLVSLQDRQ PI
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