| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6769 |
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| Symbol | |
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| ID | 6181692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | + |
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| Start bp | 262977 |
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| End bp | 266126 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641685515 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_001812420 |
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| Protein GI | 172064770 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCG GCAATTTCGG CGCCCTGCCC GCCTACGCTG AGCTCCAAGT CGCCAGCGAC
TTCTCCTTCC TGCACGGCGC GTCGCGCGCG GAGGAATACG TGGCGCGCGC GGCGCAGCTC
GGCTACAGCG CGATCGCGAT CACGGACGAA TGCTCGCTCG CCGGCGTCGT GCGCGCGCAC
GTCGAAGCGA AGGCGGCGAA CATGCCGCTG ATCATTGGCT CGCACTTTCG GCTGACGGCC
GCCGATGGCG CGCCCGCGCT CGCCTTCACT GCACTCGCGA TGAATCGGGA CGGTTACGGC
AACCTCTGCG AATTCATCTC GCTCGGTCGC ATGCGCGGCA AGAAAGGCAC GTACCGCCTG
GCGCCCCTCG ATGTAGAGCA CCCGGAAGCG CCGTTCACCC ACCTGCGCAC CCTGCCCGAT
TGCATCGCGA TCCTGTCGCC CGACTTCCCC GCCAACGAGC AGCGCCTCGA CGCGCAGGTC
GAATGGTTCG CGCGCGTGTT CGGCGATCGC GCATGGGTCG CGCTGACGCT GCACGCACGC
GCGATGGACG ACATCCACCG CGGCGTGGTC GAGCGCGTCG CCGCGCGCCA CGGCGTGCCG
GTGGTGGCCA CCAGCTGGCC GCTGATGCAC GTCCGGTCGC GCAAGCCGCT GCAGGACGTG
TTGACGGGAA TCCGGGTCGG CCGACCGGTA ACGGAGTGCG GGTACGAGCT CGCGCCGAAC
GCGGAGCGTC ACCTGCGATC GCGTCTGCGG CTCGCCAATC TCTATCCCGC CGGCGCGCTC
GAGGAAACCG TGCGTGTCGC GCGACGCTGC ACGTTCTTGC TCGACGACCT GAAGTACGAG
TATCCCGACG AACTGGTACC GGCCGGCACC GACGCGACGA CATACCTGCG CGAGCAGACC
TACATCGGCG CGCGGCGGCG CTTCCCCGCC GGCATCCCGA TCGACGTCCA GGCGCAGATC
GAGCACGAGC TGCAGCTGAT CGCCGACCTG AAATACGAGG CGTATTTCCT GACCGTCTAC
GACATCGTGC AATTCGCGCG CGAGCAGGGC ATCTTGTGCC AGGGACGCGG CTCGGCGGCA
AACTCGTCCG TTTGCTACTG CCTCGGCGTG ACCGAGGTCG ACCCGTCGCG GCAATCGATG
CTGTTCGAAC GGTTCATCTC GAAGGAGCGG AACGAGCCGC CCGATATCGA CGTCGATTTC
GAGCATCAGC GTCGCGAAGA GGTCATGCAG TACATCTACC GCAAGTACGG GCGCGATCGC
GCAGCGCTGA CGGCCGCCGT CACGACGTAC CGGCCGCGCA GCGCGTTGCG GGAAGCCGGC
AAGGCGCTCG GCGTGGATCC CGCGATCGTC GATCGCGTGG CGAAGCAACA CCACTGGTTC
GATTCGCGTG CCGATTTGCT GCAGAGGTTT GCCGAAGCCG GCCTCGATCC CGAAGCGCCG
CTGAACCAGC AGTGGGCGGG ATTCGCCGCG CAGCTGCTCG GCTATCCGCG GCATCTGTCG
CAGCACTCGG GCGGCTTCGT GATCAGCCGC GGCAAGCTCA CGCGCCTCGT GCCGGTCGAG
AACGCAGCGA TGGAGGACCG CTCGATCATC CAGTGGGACA AGGACGACAT CGAGGCGCTC
GGTATCCTGA AGATCGACGT CCTGGCGCTC GGCATGCTGT CGATGGTGCG ACGCGCGCTC
GACATGATCT CGGAGAAGCG CGGCGAGACG TTCGAACTCC AGGACATTCC GGCCGAAGAC
ATGGCGACCT ACGACATGCT GTGCGACGGC GACAGCATGG GCGTGTTCCA GGTGGAATCG
CGCGCGCAGA TGTCGATGCT GCCGCGCCTG CGGCCGCAGT GCTTCTACGA CCTGGTGATC
GAAGTCGCGA TCGTGCGGCC GGGCCCGGTG CAAGGCGGTA TGGTGCATCC GTTTCTGCGC
CGGCGCCAAG GACTGGAGCG CGTCACCTTT CCGTCGGAAG GCATGGAGAA GGCACTGGCG
CGCACGCTCG GCGTGCCGAT CTTCCAGGAG CAGGTGATGC AGGTCGCGAT GCTGGCCGCC
GGCTTCTCCG CCGGCGAAGC CGACCAGCTG CGCCGCGCGA TGGCGGCATG GAAGCGCAAG
GGCGGACTGG AGCCTTACCA CGAGCGTCTG GTGAACGGCA TGCTCGAACG CGGCTACGAC
CGCGAGTTCG CCGAATCGAT CTTCGCGCAG ATCAAGGGCT TCGGCGAATA CGGTTTCCCG
GAGAGCCACG CGGCCAGCTT CGCGCTGCTC GTCTACTCGA GCGCGTGGCT GCGTCGACAC
GAACCGGCCG TGTTCCTGAC CGCCCTGCTC AATAGCCAGC CGATGGGCTT CTACACACCG
TCGCAGTTGC TGCAGGACGC GCGGCGCCGC GGCGTTGAGG TGCTGCCCGT CGACGTCAAC
GTGAGCACGT GGGATTCAGC GATCGAAGGG CCGACGACCG AGGCGCCCGT GCGCCTGGGC
TTCTCGTTGT TGCGCGGCAT GCGCGAGGAC GTCGCCGGCC GCATCGAGCT CGCACGCGCT
GCGCGGTCAT TCGTCGACGT CGCGGATCTC GCGCGCCGCG CGCGGCTTGA TCGGCACGAC
CTGCAGGTGC TCGCGCGCGC GAACGCCCTC CGCTCACTCG CCGGCGGCAA CCGACGCGCC
GCGCTCTGGC TGGCCGCCGC CGCGGTCCCC GATCGGGATC TGCTGCGCGC CACCGAGCGC
GACGACGCGG TGCCGGCACT GCCGCAAGCA TCGGAGGGCA AGGAGATCGT CACCGACTAT
CACGCGATGG GCTTCACGCT CGGCCGGCAT CCGCTGGCGC TGCTGCGCGA ACGCCTGGCG
CTCGATCGCC TGCAGTCGGC CGAACAGCTG CAGACGTTGC GCAGTGGCCA GCTCGCGCGC
GCGTGCGGAC TGGTTACGGT ACGGCAGCGG CCGGGCACGG CGAACGGCGT GCTGTTCATG
ACGCTCGAGG ACGAGACCGG CCAGGTGAAT GTGATCCTCT GGCCCGGCCT GCTGGAAAAA
TTTCGGAAGG AAGCGCTCGG CGCCGCGCTG CTCGCCGTGT ACGGCGTATG GCAGGCCGAA
GGTAAAGTGC GGCATCTGAT CGCGAGCAAG CTCGTCGACA GGACCGAGCT CCTCGGTGCC
CTGCCGACGA CGGCGCGGGA GTTTTGCTGA
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| Protein sequence | MNAGNFGALP AYAELQVASD FSFLHGASRA EEYVARAAQL GYSAIAITDE CSLAGVVRAH
VEAKAANMPL IIGSHFRLTA ADGAPALAFT ALAMNRDGYG NLCEFISLGR MRGKKGTYRL
APLDVEHPEA PFTHLRTLPD CIAILSPDFP ANEQRLDAQV EWFARVFGDR AWVALTLHAR
AMDDIHRGVV ERVAARHGVP VVATSWPLMH VRSRKPLQDV LTGIRVGRPV TECGYELAPN
AERHLRSRLR LANLYPAGAL EETVRVARRC TFLLDDLKYE YPDELVPAGT DATTYLREQT
YIGARRRFPA GIPIDVQAQI EHELQLIADL KYEAYFLTVY DIVQFAREQG ILCQGRGSAA
NSSVCYCLGV TEVDPSRQSM LFERFISKER NEPPDIDVDF EHQRREEVMQ YIYRKYGRDR
AALTAAVTTY RPRSALREAG KALGVDPAIV DRVAKQHHWF DSRADLLQRF AEAGLDPEAP
LNQQWAGFAA QLLGYPRHLS QHSGGFVISR GKLTRLVPVE NAAMEDRSII QWDKDDIEAL
GILKIDVLAL GMLSMVRRAL DMISEKRGET FELQDIPAED MATYDMLCDG DSMGVFQVES
RAQMSMLPRL RPQCFYDLVI EVAIVRPGPV QGGMVHPFLR RRQGLERVTF PSEGMEKALA
RTLGVPIFQE QVMQVAMLAA GFSAGEADQL RRAMAAWKRK GGLEPYHERL VNGMLERGYD
REFAESIFAQ IKGFGEYGFP ESHAASFALL VYSSAWLRRH EPAVFLTALL NSQPMGFYTP
SQLLQDARRR GVEVLPVDVN VSTWDSAIEG PTTEAPVRLG FSLLRGMRED VAGRIELARA
ARSFVDVADL ARRARLDRHD LQVLARANAL RSLAGGNRRA ALWLAAAAVP DRDLLRATER
DDAVPALPQA SEGKEIVTDY HAMGFTLGRH PLALLRERLA LDRLQSAEQL QTLRSGQLAR
ACGLVTVRQR PGTANGVLFM TLEDETGQVN VILWPGLLEK FRKEALGAAL LAVYGVWQAE
GKVRHLIASK LVDRTELLGA LPTTAREFC
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