| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6763 |
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| Symbol | |
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| ID | 6181686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | - |
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| Start bp | 248674 |
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| End bp | 250710 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641685509 |
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| Product | filamentous haemagglutinin outer membrane protein |
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| Protein accession | YP_001812414 |
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| Protein GI | 172064764 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01731] adhesin HecA family 20-residue repeat (two copies)
[TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.198523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.504968 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAACA AGTTACTGAA GTCGACTCTA ATCGTCGCGA TGGCTGGCGC ATCCAAATTT
GCTATCGGGG CAGGAATCGT TCCGGATGGA GGGACAGCAA CGACTGTCTC GACGGGGGCG
GGTGGTCGCC AAACTGTCAA TATCGCCCCC GCGATCGGTG GCGTCTCCAA TAATACCTAC
TCGTCGTTCA ACGTCTCGAA AGCCGGCGCT GACCTCAACA ACGCCGGGGT GAACGCACGC
ACGGTCGTCA ACCAGGTTAC GAGCACGAAT CCGTCGCTGA TTCAGGGCAA CGTCAACGTG
CTTGGCCCGC GTGCGAACGT GATCCTGGCG AATCCGAACG GCGTCACGGT CGACGGCGGC
AGCTTCACGA ACACTGGGCA CGTCGTGCTT TCAACGGGGC AGGTCGGTTT TACCGATCTC
ACGCTCGCAC CCGGCGTCGT GCAGCGGAAC ATCGTGCTCA CCACCGATCG CGGCGCGATC
ACGATCGGTC CAGGCGGGTT GTCCGGCACG CTGGTGAACC TCGATCTGAT CGCCAAGCAG
TTGAGCATCA ACGGCCCGGT CACGAACGAT TTCACGAGCT CGACGAGCGG CATCCGTGTG
GTTGTCGGGG ACAGCACGGC CACTTACGAC ACTAGTTTCT CCCCATCTGA CAACGGTCAC
GATTGGCTGA TCGGTACGTC TTCACCGGGG ACCAAAAGCA ACGCCGTCGC CGTCGATATC
ACGGCGGCCG GTGGCCTGAC GGCCGGCCGT GTCCAGCTGA TCGTCACCGA CCAGGGCGCG
GGTGTGCATA GTCTCGGCAA GGTCTATGCA AACGCCGGTG ACGTCGTCGT GACGGCGAGC
GGCGACATCG CGATCGCAGA CGGATCCTTG AAGGCCGAGC GGGACGTCGC GCTCGCGACG
CCTGGCACTG TGTCGTTGAC GGGCGCCCAG GTGACCGCCG CGAACAATGT GAACGTTCAG
GCCGGCAACA TCGCGCTGTC CGACGACGCC ACCGGCCCTA CGACGGTGAG CGCAGGCAAC
ACGGTCAATC TGACGAGCAG CGGCGCAATC GCCAACACCG GCAGCCTGAT TCAGGCCGGC
ACCACGGCGA GCGACGGCAC GGCGACCGGC GGTGACGTGA TTCTCACGGC TGCCGGCGAC
ATCACCAACC GCTCGAGCGC GAACAATCTC GGGATCATGT TTGCCGCCAA CGGTCAGACG
AAGTTGACCG CCGGCGGCAA CATCATCAAC GACAACGCGC GCATCCTGTC CAACGACGCA
GTGAGCCTCA CCGCGGCCGG CGACGTGCAG AACATCATCG ACCATACCGG CGGCACGAAC
GGCGGCCAGC CCACCGCCTA TTCCGACCGC GGCGGCAGCT TCCTGTTCTT CACCCATACG
ACGAGCGGCT TCAATGTCGA CTACGGCACG GTGGGCAACC CGGATCAGCT TGCCTATATC
GCTGCTGTGC ACGGCCCAGT GACGATCACG AGCCGCAACT TCACGAATGC CGGTGGGATC
GTTCAATCGA ACGACGGCGA CGTCAATATC ACCGCTCAAA ACGCCTTCAC CAACGCCGCC
GTCTTCACGG GCCAGGCGAG CTATACCCGC AGCTGCTGGA TATTCTGCCA CGCCGATGCA
TCGAGCAACG TCACGCCGTA CGGTGGCACG ATCCAGGCGG GTGGGAACGT CGGCATCAAG
GCCGGCACGG TGGCACGTAA CGTCGGCGGG AACGTCTTCG CTAACGGCGA CATCAAGGTC
GATGCACCGA TCACGTACGC GCAAGGTGTG ACTGGCTACT CGGCCATCAA CCAGCACCGC
GGTTTCAAGG CGTTCTTCGG CAGCACGTGG GCGCAGATCA TCGCAATGGA CGTGGGTGGC
GGTTTTAGCG CGAACGGCAG CGTGACGCTG ACGGGCGACG GCGTGATCGA TGGTGGCTCG
TTCAGCGGCG GGAAGGGTGT CTCGGCGGCT GGTGGTATCA CGACCGTGCG TGCGCCGTCG
CGCACACCGG TCCAGATCGA CCAGCATCTG GGCCTGACAA CGTGGTGGTG GAGATGA
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| Protein sequence | MRNKLLKSTL IVAMAGASKF AIGAGIVPDG GTATTVSTGA GGRQTVNIAP AIGGVSNNTY
SSFNVSKAGA DLNNAGVNAR TVVNQVTSTN PSLIQGNVNV LGPRANVILA NPNGVTVDGG
SFTNTGHVVL STGQVGFTDL TLAPGVVQRN IVLTTDRGAI TIGPGGLSGT LVNLDLIAKQ
LSINGPVTND FTSSTSGIRV VVGDSTATYD TSFSPSDNGH DWLIGTSSPG TKSNAVAVDI
TAAGGLTAGR VQLIVTDQGA GVHSLGKVYA NAGDVVVTAS GDIAIADGSL KAERDVALAT
PGTVSLTGAQ VTAANNVNVQ AGNIALSDDA TGPTTVSAGN TVNLTSSGAI ANTGSLIQAG
TTASDGTATG GDVILTAAGD ITNRSSANNL GIMFAANGQT KLTAGGNIIN DNARILSNDA
VSLTAAGDVQ NIIDHTGGTN GGQPTAYSDR GGSFLFFTHT TSGFNVDYGT VGNPDQLAYI
AAVHGPVTIT SRNFTNAGGI VQSNDGDVNI TAQNAFTNAA VFTGQASYTR SCWIFCHADA
SSNVTPYGGT IQAGGNVGIK AGTVARNVGG NVFANGDIKV DAPITYAQGV TGYSAINQHR
GFKAFFGSTW AQIIAMDVGG GFSANGSVTL TGDGVIDGGS FSGGKGVSAA GGITTVRAPS
RTPVQIDQHL GLTTWWWR
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