| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6761 |
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| Symbol | |
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| ID | 6181684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | - |
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| Start bp | 246735 |
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| End bp | 248528 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641685507 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_001812412 |
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| Protein GI | 172064762 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.306562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATTT CGTTCAAGCG ATGGCTGGGT GCGATTCCGG CCGTCGCAGT CATGCATGCG
CCCGTGTTTG CGCAAACGCC ACCGACGCCA GCCGGTCGAC CCGTGCAGGA TCCGGCGCAA
CTGATCATCG AGCAGCAGCG CGAGCAGGCG CGACAACGAC AACTCGAACA ACCGCCGGCC
TCGATTACCG TTGCACCGAC GCCGGAGACG ACGCTCGACA TCCCGGTGGA TACGCCGGTC
GATGCCATCG CCGAAACCGG ACCGACCTTC GCCGTGAAGG AGATCGTGCT GCAGACACCT
GACGGCAAGC CGTTCGAGCC GCCTCGCGGG ATCTCAGTCA AGCAGCTCGA TGCGATCGTG
GCGCCGTTCG CGAACCACGA GCTCGGCTCG CACCGCATCA ACGTGCTGCT GAAGCGCATC
ACGGACGTAT TCGTCGCACA TGGGCTCGTA ACGACGCGTG CGCTGCTCGG CCCGCAGAAT
CTGGCCACCG GCACGCTGAA GATCACGATT CAGGTCGGCA CCATCGAAGC ATTCACTGTC
AACGGCAAGC CGATTCACCG GCTCAAGGCC GGCGAAGCGT CAGCGGGTGG TGGGTGGTTC
ACGGACGCCG GCTATGAGAA CGCGTTTCCG GTATCGTCCG GCGATCCGCT GCGCCTGTCT
GACATCGACC AGGGCGTCGC GCAGGTCAAC CGCCTGCGCC GCAACCAGGC GACGGTGCAG
ATCCTGCCCG GCCAGAATCC GGGCGAATCG ATCGTCAACG TCGGTAACAA GCCGGGGGAT
CGCCTGTACT ACACGTTGGG CGTCGACAAC TACGGCAGCT CGGCCACGGG CGTGACGCGC
TATCGCGCCG GCGTCGAGGC CGACAACCTG CTCGGCCTGC AGGAGTCGCT GAGCGTTAAC
TTCCTCGACA GCCTCGACAG CAATGCAATC GTCGGCTCGT TCGCAGTGCC GTTCGGCCGC
CATACGTTCA GCTACACGAT TTCTGATTCG GAATACCAGC AAGTGATCGG CACGACCGCG
CTCGAATACG GCCGCACGCT GTCGCACATC TTCGGCTGGA ATTATCTGGT GAGCCGTAGC
GTGAGCGACA TCACGAGCGT TGACGCCACG GTGTCCTGGC GCCGCACCGA CCGCGAGGTC
AATGGCATCG ACCTGGATCC GCAGCGCGTG GCCGTGTTGC GGCTGGCCGG TAACTGGTTG
CACAAGTTCG TGATGAACGA CGCGCAGGGG AATTTCACGA TCAACGGCGG GCTGTCGCAG
GGCTTGCCGT GGTTCGGCGC GAATCACGAC GCGCATGGCA TCACGCGCGA CGACGCGCAC
AGCCAGTTCA CGAAGGTCGA TGCGACGGCC GCATTCACGC TGCCGCTGCC GAAGATCGGA
CCCGCGCTGG TCGCGTATCG CGGTGTGCTG GGCGGGCAAT ATACGAACAT GGCGCTGTTC
GGATCGGAGC AGCTGTATCT TGGCGGCATG GATACGATCC GCGGCTTCCG CTCGGGCGAG
ATCGCGGGCG ACCGCGGTTT CTATTCGCGC AACGAGCTCG CGTGGGTGAA TGCGCCGGCA
TGGAAGGACG GTCGAATCGA ACCGTATGTG TTCGTCGACG CGGGCAAGGC TAGCCTCGTC
TCGGTCCCTG GTTTTCCGAC ATTGGCCGGT GCGGGCGCGG GACTTCGAGC GCAATGGCAG
TGGCACAAAC AGATGCTCTC GGGCGAGCTC ACGGTCGGAC GCGCACTGAC GCAGCCGGCC
GCCCTCGGCC CGAAGGCGAC CCTTGTACTT GGCACCTTGA ATTGGACAAT GTAG
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| Protein sequence | MPISFKRWLG AIPAVAVMHA PVFAQTPPTP AGRPVQDPAQ LIIEQQREQA RQRQLEQPPA
SITVAPTPET TLDIPVDTPV DAIAETGPTF AVKEIVLQTP DGKPFEPPRG ISVKQLDAIV
APFANHELGS HRINVLLKRI TDVFVAHGLV TTRALLGPQN LATGTLKITI QVGTIEAFTV
NGKPIHRLKA GEASAGGGWF TDAGYENAFP VSSGDPLRLS DIDQGVAQVN RLRRNQATVQ
ILPGQNPGES IVNVGNKPGD RLYYTLGVDN YGSSATGVTR YRAGVEADNL LGLQESLSVN
FLDSLDSNAI VGSFAVPFGR HTFSYTISDS EYQQVIGTTA LEYGRTLSHI FGWNYLVSRS
VSDITSVDAT VSWRRTDREV NGIDLDPQRV AVLRLAGNWL HKFVMNDAQG NFTINGGLSQ
GLPWFGANHD AHGITRDDAH SQFTKVDATA AFTLPLPKIG PALVAYRGVL GGQYTNMALF
GSEQLYLGGM DTIRGFRSGE IAGDRGFYSR NELAWVNAPA WKDGRIEPYV FVDAGKASLV
SVPGFPTLAG AGAGLRAQWQ WHKQMLSGEL TVGRALTQPA ALGPKATLVL GTLNWTM
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