Gene BamMC406_6760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6760 
Symbol 
ID6181683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010553 
Strand
Start bp245886 
End bp246734 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content65% 
IMG OID641685506 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_001812411 
Protein GI172064761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACT CGAACTGGAA AACTTTTATC GCCGCATCGG CGCTTTACCT CGGTATCGCC 
TGTGTCGCGC AAGCTCAAAC ACCCGCTTCG TCGACGTCGC CGGTCGGCGT CGTGGCAACC
GTTAACGGCA CCGCGATCAC GCAGGCGGAA GTCGATACGG TGCTGCGGGC CTCGCGCCAG
CCGGATACGC CGCAGGTACG CCAGGCGATC AAGAATCAGC TGATCGCCCG CGTGCTGATC
CAGCAGGCCG CCGAGAAGGC GAACTACGGT AGCAAGCCGG AAGTGCAGAC GGCCATGCAG
GTGGCGAAAG CGAACGCCGA GACGCAGCTG TACCTGAAGG ACAACGTGAA ACCGGAGCCG
GTCACGGACG CGCAGATCAA GGCGCGCTAC GACGAGATCG TGGCGTCGCT CGGCAAGGAC
GAATACAAGC CGCGCCTGAT CGTCGTGAAG GATGCCGCGA CGGCCGCGAC CGTGTTGGCC
GAGTTGAAGG CGGGCAAGCC GTTCGACGGT CTCGCTCGGC AATACAGTAT CGCGCCGAGC
CGCGACGCCG GCGGCGAACT GCCGTGGGTG AGCTTCAAGA CGCCGGCCGC AGAAGGGAAG
ACGGCCGGGC TGCCGGTGGC GATCGCGCAG GCGCTCGACA AGCTGCCGGT CGGCGCCGTC
ACGCCGGAAT CAATTGCGGT CGACAATGCG CGGGCGATCG TGAAGCTCGA CGCGAAGCGG
CCGACACAGG TGCCGACGTT CAATCAGGCG CAGGCGACGA TCCACCAGCA GCTCGAGGCG
CTTGCGTTGG AGAAGGCGAG CGCGCAGTTC GTCGGCGGCT TGCTGAAGAA CGCGACGATC
CAACAATAA
 
Protein sequence
MSHSNWKTFI AASALYLGIA CVAQAQTPAS STSPVGVVAT VNGTAITQAE VDTVLRASRQ 
PDTPQVRQAI KNQLIARVLI QQAAEKANYG SKPEVQTAMQ VAKANAETQL YLKDNVKPEP
VTDAQIKARY DEIVASLGKD EYKPRLIVVK DAATAATVLA ELKAGKPFDG LARQYSIAPS
RDAGGELPWV SFKTPAAEGK TAGLPVAIAQ ALDKLPVGAV TPESIAVDNA RAIVKLDAKR
PTQVPTFNQA QATIHQQLEA LALEKASAQF VGGLLKNATI QQ