Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6760 |
Symbol | |
ID | 6181683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010553 |
Strand | - |
Start bp | 245886 |
End bp | 246734 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641685506 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_001812411 |
Protein GI | 172064761 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCACT CGAACTGGAA AACTTTTATC GCCGCATCGG CGCTTTACCT CGGTATCGCC TGTGTCGCGC AAGCTCAAAC ACCCGCTTCG TCGACGTCGC CGGTCGGCGT CGTGGCAACC GTTAACGGCA CCGCGATCAC GCAGGCGGAA GTCGATACGG TGCTGCGGGC CTCGCGCCAG CCGGATACGC CGCAGGTACG CCAGGCGATC AAGAATCAGC TGATCGCCCG CGTGCTGATC CAGCAGGCCG CCGAGAAGGC GAACTACGGT AGCAAGCCGG AAGTGCAGAC GGCCATGCAG GTGGCGAAAG CGAACGCCGA GACGCAGCTG TACCTGAAGG ACAACGTGAA ACCGGAGCCG GTCACGGACG CGCAGATCAA GGCGCGCTAC GACGAGATCG TGGCGTCGCT CGGCAAGGAC GAATACAAGC CGCGCCTGAT CGTCGTGAAG GATGCCGCGA CGGCCGCGAC CGTGTTGGCC GAGTTGAAGG CGGGCAAGCC GTTCGACGGT CTCGCTCGGC AATACAGTAT CGCGCCGAGC CGCGACGCCG GCGGCGAACT GCCGTGGGTG AGCTTCAAGA CGCCGGCCGC AGAAGGGAAG ACGGCCGGGC TGCCGGTGGC GATCGCGCAG GCGCTCGACA AGCTGCCGGT CGGCGCCGTC ACGCCGGAAT CAATTGCGGT CGACAATGCG CGGGCGATCG TGAAGCTCGA CGCGAAGCGG CCGACACAGG TGCCGACGTT CAATCAGGCG CAGGCGACGA TCCACCAGCA GCTCGAGGCG CTTGCGTTGG AGAAGGCGAG CGCGCAGTTC GTCGGCGGCT TGCTGAAGAA CGCGACGATC CAACAATAA
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Protein sequence | MSHSNWKTFI AASALYLGIA CVAQAQTPAS STSPVGVVAT VNGTAITQAE VDTVLRASRQ PDTPQVRQAI KNQLIARVLI QQAAEKANYG SKPEVQTAMQ VAKANAETQL YLKDNVKPEP VTDAQIKARY DEIVASLGKD EYKPRLIVVK DAATAATVLA ELKAGKPFDG LARQYSIAPS RDAGGELPWV SFKTPAAEGK TAGLPVAIAQ ALDKLPVGAV TPESIAVDNA RAIVKLDAKR PTQVPTFNQA QATIHQQLEA LALEKASAQF VGGLLKNATI QQ
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