| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6693 |
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| Symbol | |
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| ID | 6181600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | + |
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| Start bp | 198229 |
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| End bp | 200898 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641685441 |
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| Product | type VI secretion ATPase |
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| Protein accession | YP_001812346 |
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| Protein GI | 172064696 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.348234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATTT CAAGGCAAGC CCTGTTCGGC AAACTCAGCC ATTCGCTATT CCGCAGCGTC
GAATCCGCGA CGACTTTTTG CAAGTTGCGC GGCAACCCTT ACGTCGAGCT GGTGCATTGG
TTGCATCAAC TACTGCAGGC TCCCGACGGC GATTTGCAGC GAATCGTTCG GCACTGCGAC
ATCGACGCCG AGACGCTCGA CCGAGACGTG CTGCGCGCGC TGGCCGCACT GCCAGCCGGC
GCGAGTTCAA TCAGCGATTT TTCGCACCAT GTCGAGACCA CCATCGAGCG CGCATGGGTG
CTGGCTTCGC TGAATTTCGG CGATCGGCGG ATTCGTGGCG CGTGGCTCGT CGCCGCGCTC
GTCAAAACGC CCGAGTTGCG TCGCGTGCTG TTGTCGATCT CCCCCGCGTT CGGCAAGATT
CCGCTTGATA GCCTGGCCGA GATGTTGCCT GCTTGGATCG ACGGATCGCC GGAGGCCGGA
GACGCGCCGT ACGATGGCAC CGATTTCGGT GGCGCCGTGC CGGGCGAGGT GGCCGGCGCG
CTCGCGCCGT CGATGGCCGG CGGCTCGCCG CTCGAGCAGT ACTGCAGCGA TCTCACGGCC
CGGGCGCGCG CGGGCGAGAT CGACCCGGTT GTGGGGCGCG AACTCGAGAT CCGCACGATG
ATCGACGTGC TGTTGCGCCG GCGTCAAAAC AATCCGCTGC TCACGGGCGA TGCGGGCGTC
GGCAAGACGG CTGTGGTCGA GGGCCTCGCC CGAGCGGTCG TCGACGGCGA CGTGCCGCCG
AAGCTCGCCG ACGTGCGCCT GCTGAGTCTT GACGTCGGCG CGCTGCTCGC CGGCGCAAGC
ATGAAGGGCG AGTTCGAGGC GCGCCTCAAG GGCGTGCTTG AGGCGGCGAC GAAATCGACC
GTGCCGGTCA TTCTGTTCGT CGACGAGATC CACACGCTGA TTGGTGCGGG CGGCCACGCC
GGCACGGGCG ACGCCGCGAA CCTGCTGAAG CCGGCGCTGG CGCGCGGCAC GCTGCGGACG
ATCGGCGCGA CGACTTGGTC CGAATACAAG CGGTATATCG AAAAGGACCC GGCGCTGACG
CGCCGCTTCC AGGTGCTCCA GGTCCCGGAG CCTGAGGAGG CAGCCGCGAT CGACATGGTG
CGCGGGCTCG CGCGGACCTT CTCTCGGCAT CACGGGGTCG TCTTGCTTGA CGAGGCAATT
CGCGCGGCGG TCACGCTGTC GCATCGCTAC ATTCCGTCCC GGCAACTGCC GGATAAGGCG
ATCAGCCTGC TCGATACTGC CTGCGCACGC GTGGCGCTGT CTCAGCACGC GCCGCCGGGC
GAGCTGCAGG ACGTGCGCCA GCGATTACAG GCCGCGCGCG TCGAATGCGA CCTGATCGAC
CATGAATGGC GCATCGGTCT CGGCGACGGG GACGCGCTGG CCCGCTCGCG GGCGCGCATT
GCGGATCTGG AACGGGAGGC GGACGGCGTC GAGGCGCGCT GGCGGGCGCA GGCCGATGCC
GCGCAGGCAT TGTTGAGCGC GCGGGAGGCG GCCGCCGAAG CCCAGGGCGA CGTGCCGGAC
GCTGGATTGC ATGCGTTTGA GCGCGCGCTC GCGGATCTGC AGGGCGAGAC GGCGCTCGTC
TTCCCAGAAG TGAATGAGGT GATCGTCGCC GAAATCGTGT CGGACTGGAC CGGCATTCCG
GTGCGCAGGA TGGTTACCGA CGAGGTCACG GCGGTGCTCG CGCTCCCCGA CACTCTGTCG
GCCCGTGTGA TCGGGCAGTC GGATGCGTTG CTGCAGATCG GCGAGCGGGT GCAGACCGCG
CGCGCAGGGC TGACCGACCC GAAAAAGCCG CTGGGCGTCT TCCTGCTTGC CGGCCCGTCG
GGCGTGGGCA AGACAGAGAC GGCGCTGGCG CTTGCCGAGG CGCTGTACGG CGGTGAGCAG
AACCTGATCA CGATCAACAT GAGCGAGTAT CAGGAGGCCC ATACGGTTTC CGGGTTGAAG
GGCGCGCCGC CTGGCTATGT CGGTTACGGC GAGGGAGGCG TACTGACCGA GGCAGTGCGG
CGCCGGCCGT ATTCGGTCGT CCTGCTCGAC GAGATCGAGA AGGCGCATGG CGATGTCCAT
GAGATGTTCT TTCAGGTGTT CGATAAGGGT TATATGGAAG ACGGCGACGG CCGCTACATC
GATTTCCGCC ACACAACGAT CCTGCTCACG AGCAATGCTG GCTCCGATCT GATCGCGAGC
CTGTGTGCGG ACGAAATGCT CGTGCCCGAC GCGGACGCGC TGCGCACGGC GCTCGTACCG
GAATTGCTGA AGACGTTCCC TGCGGCATTT CTCGGTCGCG TGACGGTGGT GCCGTACCGG
CCGCTCGCGC AGGCGACGCT TTCGCAAATC GTGCGCCTGC ATCTGGACCG CGTCGTCGCC
CGCATGGCCG ACGGACACGG CGTGGCGTTC AGCTACGCGC CGGCCGTGCT CGATTACATC
GTTGACCGTT GTCTAGTGCA GGAAACGGGG GCGCGCTTAC TGATCGGGTT TCTCGAGCAG
CACGTGCTAC CGCGACTCGC CGCGCAATGG CTCGACGCGC TGGAGTCGAA GCGCACGCTC
ACTCGCGTTG AGCTCGATTT GGCCGACGCG GGCGCAGCGC CAGCGGAGGC ATTCGTGTTC
CATGCGTCCG GCGCGCAAGC GGATGAATGA
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| Protein sequence | MTISRQALFG KLSHSLFRSV ESATTFCKLR GNPYVELVHW LHQLLQAPDG DLQRIVRHCD
IDAETLDRDV LRALAALPAG ASSISDFSHH VETTIERAWV LASLNFGDRR IRGAWLVAAL
VKTPELRRVL LSISPAFGKI PLDSLAEMLP AWIDGSPEAG DAPYDGTDFG GAVPGEVAGA
LAPSMAGGSP LEQYCSDLTA RARAGEIDPV VGRELEIRTM IDVLLRRRQN NPLLTGDAGV
GKTAVVEGLA RAVVDGDVPP KLADVRLLSL DVGALLAGAS MKGEFEARLK GVLEAATKST
VPVILFVDEI HTLIGAGGHA GTGDAANLLK PALARGTLRT IGATTWSEYK RYIEKDPALT
RRFQVLQVPE PEEAAAIDMV RGLARTFSRH HGVVLLDEAI RAAVTLSHRY IPSRQLPDKA
ISLLDTACAR VALSQHAPPG ELQDVRQRLQ AARVECDLID HEWRIGLGDG DALARSRARI
ADLEREADGV EARWRAQADA AQALLSAREA AAEAQGDVPD AGLHAFERAL ADLQGETALV
FPEVNEVIVA EIVSDWTGIP VRRMVTDEVT AVLALPDTLS ARVIGQSDAL LQIGERVQTA
RAGLTDPKKP LGVFLLAGPS GVGKTETALA LAEALYGGEQ NLITINMSEY QEAHTVSGLK
GAPPGYVGYG EGGVLTEAVR RRPYSVVLLD EIEKAHGDVH EMFFQVFDKG YMEDGDGRYI
DFRHTTILLT SNAGSDLIAS LCADEMLVPD ADALRTALVP ELLKTFPAAF LGRVTVVPYR
PLAQATLSQI VRLHLDRVVA RMADGHGVAF SYAPAVLDYI VDRCLVQETG ARLLIGFLEQ
HVLPRLAAQW LDALESKRTL TRVELDLADA GAAPAEAFVF HASGAQADE
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