| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6690 |
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| Symbol | |
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| ID | 6181597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | - |
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| Start bp | 195350 |
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| End bp | 195871 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641685438 |
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| Product | type VI secretion system lysozyme-related protein |
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| Protein accession | YP_001812343 |
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| Protein GI | 172064693 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGGC CCCCTGACAA CCTGCACCGG CCAGCCTACC TGCCGTCTCT GCTCGACCGG
TTGCAGGACG ACGCGCCACA CGCGCGCCAC GAGAAGCCCA GCGCCTACGC CCCTAACGGC
GATGGCATGC GCCGCATCAT TCAGCGCGAC CTCGCCTTGC TGCTCAACGC AACCAATCTC
GACGGCGAGC TGGACGCCGT CCGCTACCCG CACGCCGCCG CGTCCGTCGT CAACTACGGC
GTGCCGCCGT TGTCGGGGAG CTATCTGAGC GACCGGAACT GGGAAACGAT CGAAAAGCTC
ATCCGCACCG CGATCGTCCG TTTCGAGCCG CGACTGCTGC GGGACTCGAT CGCGATCCGG
CCCATCGTCG GACAGGAGGC CGCCAGCTAC AACAAGCTAA TGTTCGAGAT TCGCGGACTG
ATGCAATGGT CGCCGTACCC GCTCGAATTT CTCATCCAGA GCACCTTCGA CATCGAAACC
AACAAGGTAA CGTTCGATCC GGGCGCTCGC ACCGGAAATT GA
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| Protein sequence | MTRPPDNLHR PAYLPSLLDR LQDDAPHARH EKPSAYAPNG DGMRRIIQRD LALLLNATNL
DGELDAVRYP HAAASVVNYG VPPLSGSYLS DRNWETIEKL IRTAIVRFEP RLLRDSIAIR
PIVGQEAASY NKLMFEIRGL MQWSPYPLEF LIQSTFDIET NKVTFDPGAR TGN
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