Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6674 |
Symbol | |
ID | 6181563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010553 |
Strand | + |
Start bp | 170814 |
End bp | 172313 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641685422 |
Product | EvpB family type VI secretion protein |
Protein accession | YP_001812327 |
Protein GI | 172064677 |
COG category | [S] Function unknown |
COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.585519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.849864 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTAC GTGAATCGCA GGCGCGCGCT GCCGAGACGC AGCTCAGCGC GCAATCGGAC TTCAACGCGC TGCTGTCGCG CGAATTCAAG CCCAAGACAG AGCAGGCGCG CGAAGCGGTG GAGTCTGCCG TCAAGACGAT GGCCGAGCAG GCGCTGTCGA ACTCGGTGAC GATGTCGGAC GATGCCTATA AGAGCATCGA GGCGATCATC GGCGAGATCG ATCGTAAACT GTCGGAACAG ATCAATCTTA TTCTGCACCA CGAAGAATTC CAGCAATTGG AGAGCGCATG GCGCGGGCTG CATCACTTGG TGACGAACAC GGAAACCGAC GAGAAGCTGA AGATCCGCTT CATGGACGTG TCGAAGGAGG ATCTGCGGCG CACGATGAAA CGCTACAAGG GCGTGGCGTG GGATCAGAGC CCGTTCTTCA AGCAGATCTA CGAAGAGGAA TACGGTCAGT TGGGCGGCGA GCCGTACGGC TGTCTCGTCG CGGACTATTA CTTCGACCAC ACGCCGCCGG ACGTCGATCT GTTGGCGTCG ATCGGCAAGG TCGCCGCTGC GGCGCATGCG CCGTTCATTA CGGGGGCATC GCCGGCCGTG CTGCAGATGG ATTCGTGGCA GGAGTTGGCA AACCCACGTG ACCTGACCAA AATCTTTACG CAGAATCTCG AGTACGCACC GTGGAACTCG CTGCGCAACT CGGAAGACTC GCGCTACATT GGCCTCGCGA TGCCGCGCTT CCTCGCGCGC CTGCCGTATG GCATTCGAAC CAATCCGGTC GACGAATTCG ATTTCGAGGA AGCGACCGAC GGCTCGGATC ATCGCAAGTA CACGTGGGCG AACGCGGCCT ATGCGATGGC GGTCAATATC AATCGCTCGT TCAAGCACTA TGGCTGGTGC ACGCTGATTC GCGGTGTTGA GAGCGGTGGT GTCGTCGAAA ACCTGCCGTG CCATACGTTC CCGACCGATG ACGGCGGTAT TGACATGAAG TGCCCGACCG AGATTGCGAT TTCGGACCGG CGTGAAGCGG AGCTTGCGAA GAACGGCTTC ATTCCATTGA TCCACCGCAA GAATACTGAC TACGCGGCGT TCATCGGTGC GCAATCGCTG CAGAAGCCTG CCGAATACCA CGATCCGGAC GCGACTGCGA ACGCGAACCT CTCTGCGCGT CTGCCGTATC TGTTCGCCTG CTCGCGTTTC GCGCACTACC TGAAGTGCAT CGTGCGGGAC AAGATCGGCT CGTTCAAGGA ACGGGACGAA ATGCAGCAGT GGCTCAACGA GTGGATCATG TACTACGTCG ATGCCGATCC CGCGAACTCG TCGCAGGAAA CTAAGGCCCG TCGCCCGCTC GCCGCTGCTG AGGTGGTCGT GGAAGAAGTC GAGGGCAATC CTGGCTACTA TCAGGCCAAG TTCTTCCTGC GTCCGCATTT CCAGCTGGAA GGACTGACGG TCTCGTTGCG CCTCGTCGCG AAGCTTCCGT CGGTAAAGGC GGCCGCTTGA
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Protein sequence | MAVRESQARA AETQLSAQSD FNALLSREFK PKTEQAREAV ESAVKTMAEQ ALSNSVTMSD DAYKSIEAII GEIDRKLSEQ INLILHHEEF QQLESAWRGL HHLVTNTETD EKLKIRFMDV SKEDLRRTMK RYKGVAWDQS PFFKQIYEEE YGQLGGEPYG CLVADYYFDH TPPDVDLLAS IGKVAAAAHA PFITGASPAV LQMDSWQELA NPRDLTKIFT QNLEYAPWNS LRNSEDSRYI GLAMPRFLAR LPYGIRTNPV DEFDFEEATD GSDHRKYTWA NAAYAMAVNI NRSFKHYGWC TLIRGVESGG VVENLPCHTF PTDDGGIDMK CPTEIAISDR REAELAKNGF IPLIHRKNTD YAAFIGAQSL QKPAEYHDPD ATANANLSAR LPYLFACSRF AHYLKCIVRD KIGSFKERDE MQQWLNEWIM YYVDADPANS SQETKARRPL AAAEVVVEEV EGNPGYYQAK FFLRPHFQLE GLTVSLRLVA KLPSVKAAA
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