Gene BamMC406_6674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6674 
Symbol 
ID6181563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010553 
Strand
Start bp170814 
End bp172313 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content60% 
IMG OID641685422 
ProductEvpB family type VI secretion protein 
Protein accessionYP_001812327 
Protein GI172064677 
COG category[S] Function unknown 
COG ID[COG3517] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03355] type VI secretion protein, EvpB/VC_A0108 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.585519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.849864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTAC GTGAATCGCA GGCGCGCGCT GCCGAGACGC AGCTCAGCGC GCAATCGGAC 
TTCAACGCGC TGCTGTCGCG CGAATTCAAG CCCAAGACAG AGCAGGCGCG CGAAGCGGTG
GAGTCTGCCG TCAAGACGAT GGCCGAGCAG GCGCTGTCGA ACTCGGTGAC GATGTCGGAC
GATGCCTATA AGAGCATCGA GGCGATCATC GGCGAGATCG ATCGTAAACT GTCGGAACAG
ATCAATCTTA TTCTGCACCA CGAAGAATTC CAGCAATTGG AGAGCGCATG GCGCGGGCTG
CATCACTTGG TGACGAACAC GGAAACCGAC GAGAAGCTGA AGATCCGCTT CATGGACGTG
TCGAAGGAGG ATCTGCGGCG CACGATGAAA CGCTACAAGG GCGTGGCGTG GGATCAGAGC
CCGTTCTTCA AGCAGATCTA CGAAGAGGAA TACGGTCAGT TGGGCGGCGA GCCGTACGGC
TGTCTCGTCG CGGACTATTA CTTCGACCAC ACGCCGCCGG ACGTCGATCT GTTGGCGTCG
ATCGGCAAGG TCGCCGCTGC GGCGCATGCG CCGTTCATTA CGGGGGCATC GCCGGCCGTG
CTGCAGATGG ATTCGTGGCA GGAGTTGGCA AACCCACGTG ACCTGACCAA AATCTTTACG
CAGAATCTCG AGTACGCACC GTGGAACTCG CTGCGCAACT CGGAAGACTC GCGCTACATT
GGCCTCGCGA TGCCGCGCTT CCTCGCGCGC CTGCCGTATG GCATTCGAAC CAATCCGGTC
GACGAATTCG ATTTCGAGGA AGCGACCGAC GGCTCGGATC ATCGCAAGTA CACGTGGGCG
AACGCGGCCT ATGCGATGGC GGTCAATATC AATCGCTCGT TCAAGCACTA TGGCTGGTGC
ACGCTGATTC GCGGTGTTGA GAGCGGTGGT GTCGTCGAAA ACCTGCCGTG CCATACGTTC
CCGACCGATG ACGGCGGTAT TGACATGAAG TGCCCGACCG AGATTGCGAT TTCGGACCGG
CGTGAAGCGG AGCTTGCGAA GAACGGCTTC ATTCCATTGA TCCACCGCAA GAATACTGAC
TACGCGGCGT TCATCGGTGC GCAATCGCTG CAGAAGCCTG CCGAATACCA CGATCCGGAC
GCGACTGCGA ACGCGAACCT CTCTGCGCGT CTGCCGTATC TGTTCGCCTG CTCGCGTTTC
GCGCACTACC TGAAGTGCAT CGTGCGGGAC AAGATCGGCT CGTTCAAGGA ACGGGACGAA
ATGCAGCAGT GGCTCAACGA GTGGATCATG TACTACGTCG ATGCCGATCC CGCGAACTCG
TCGCAGGAAA CTAAGGCCCG TCGCCCGCTC GCCGCTGCTG AGGTGGTCGT GGAAGAAGTC
GAGGGCAATC CTGGCTACTA TCAGGCCAAG TTCTTCCTGC GTCCGCATTT CCAGCTGGAA
GGACTGACGG TCTCGTTGCG CCTCGTCGCG AAGCTTCCGT CGGTAAAGGC GGCCGCTTGA
 
Protein sequence
MAVRESQARA AETQLSAQSD FNALLSREFK PKTEQAREAV ESAVKTMAEQ ALSNSVTMSD 
DAYKSIEAII GEIDRKLSEQ INLILHHEEF QQLESAWRGL HHLVTNTETD EKLKIRFMDV
SKEDLRRTMK RYKGVAWDQS PFFKQIYEEE YGQLGGEPYG CLVADYYFDH TPPDVDLLAS
IGKVAAAAHA PFITGASPAV LQMDSWQELA NPRDLTKIFT QNLEYAPWNS LRNSEDSRYI
GLAMPRFLAR LPYGIRTNPV DEFDFEEATD GSDHRKYTWA NAAYAMAVNI NRSFKHYGWC
TLIRGVESGG VVENLPCHTF PTDDGGIDMK CPTEIAISDR REAELAKNGF IPLIHRKNTD
YAAFIGAQSL QKPAEYHDPD ATANANLSAR LPYLFACSRF AHYLKCIVRD KIGSFKERDE
MQQWLNEWIM YYVDADPANS SQETKARRPL AAAEVVVEEV EGNPGYYQAK FFLRPHFQLE
GLTVSLRLVA KLPSVKAAA