| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6673 |
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| Symbol | |
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| ID | 6181562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | + |
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| Start bp | 170205 |
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| End bp | 170762 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641685421 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001812326 |
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| Protein GI | 172064676 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.72757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.388479 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCAAGC TGGAGAAGCT TATGGCCATA TCCAACAGTG CACAGAAATT TATTGCGCGC
AATCGTTCGC CGCGCGTCCA GATCGAGTAC GACGTCGAAA TTTACGGCTC GGAAAAGAAG
GTGGAGTTGC CGTTTGTAAT GGGCGTGCTC GCCGATCTGT CCGGCAAGCC GTTGGAGGCG
CTTCCTGCTG TCGGCGACCG CAAGTTCTAC AACATCGACA TCGATAACTT TGATGAGCGG
ATGAAGGCGA TGAAGCCCCG GGTGGCCTTT TCGGTGCCAA ATACGCTGTC TGGCACCGGA
CAGCTGATGG TCGACATCAC GTTCGAGAGC ATGGACGACT TTTCGCCAGC GGCTGTTGCG
AAAAAGGTCG ATGCGCTGTC GCAGCTGCTC GAAGCGCGGA CGCAACTCGC GAACCTGCAG
ACCTACATGG ACGGCAAGTC GGGCGCGGAG AACCTCGTTA GCCAGGTGCT GAAGGATCCG
GCGTTGCTCA ATGCGCTCGC CAAAGCGCCG AAGCCTGAAG CGCGGAAGGC GGCAGCTCCG
GAACCGCAAG AGCAATAA
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| Protein sequence | MIKLEKLMAI SNSAQKFIAR NRSPRVQIEY DVEIYGSEKK VELPFVMGVL ADLSGKPLEA
LPAVGDRKFY NIDIDNFDER MKAMKPRVAF SVPNTLSGTG QLMVDITFES MDDFSPAAVA
KKVDALSQLL EARTQLANLQ TYMDGKSGAE NLVSQVLKDP ALLNALAKAP KPEARKAAAP
EPQEQ
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