| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6637 |
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| Symbol | |
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| ID | 6181784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | + |
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| Start bp | 129176 |
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| End bp | 129928 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641685397 |
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| Product | Pili assembly chaperone, N-terminal |
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| Protein accession | YP_001812302 |
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| Protein GI | 172064652 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000480181 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000170705 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCATTTA GAAGATTTTG GCAGAACAGC GTAGTCGCTG TGTTCTGCGC TGCGTCGCTG
GGCGCCGCGG CCCCGAGTCA AGCGGGGGTT GTCGTGTCGG CTACGCGGGT CGTGTATTCC
TCGGACAGCC GTGAAGTCAG TGTGCGTTTG ACCAACGAGG GCGGCTCGCC GGTGCTGGTG
CAGACGTGGC TGGATACGGG TGACGAGGCG GCAAAGCCGG AGGCGCTGCA AGTGCCGTTC
ACCTTGGCGC CACCGGTGTT CCGGATGAAT CCGGGGCGGG GGCAGACGAT CCGGATGATG
TATACGAAGG AACCGTTGCC GCAGGATCGC GAGACGGTTT TCTGGCTGAA CGTGCTGGAA
ATTCCGCCCA AGGTTAAGGG GGCGGACGGG GCCAATCACC TGCAAGTGGC ATTCCGCTCG
CGCATCAAGG TGTTCTTCCG CCCCAAGGGT TTGGCGGGTA CGCCGGATGA AGCGCCATCG
AAGGTGATTT GGTCGGTGGT GCCAATGAGC GATGGAGGGG GGTATGGTCT GAAAGCCACC
AACCCGACGC CGTACGCCGT GTCGTACGGG AAAGTCAGTC TCGAGTCCGG AGGGCAGTCG
CTGGAGGCGC AAAGCACGAT GGTGTTGCCC GATACCTCGA GAGTGTTTCC GCTGACGGGG
GGCAAGGGTC GGCCCTCTGG CGGTGCCAAG GTGAGCTATC AGTACATCGA TGATTTCGGC
GCCGTGCGCG ACGGATCGTC AGTCGTGAAT TAA
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| Protein sequence | MSFRRFWQNS VVAVFCAASL GAAAPSQAGV VVSATRVVYS SDSREVSVRL TNEGGSPVLV
QTWLDTGDEA AKPEALQVPF TLAPPVFRMN PGRGQTIRMM YTKEPLPQDR ETVFWLNVLE
IPPKVKGADG ANHLQVAFRS RIKVFFRPKG LAGTPDEAPS KVIWSVVPMS DGGGYGLKAT
NPTPYAVSYG KVSLESGGQS LEAQSTMVLP DTSRVFPLTG GKGRPSGGAK VSYQYIDDFG
AVRDGSSVVN
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