Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6588 |
Symbol | |
ID | 6181584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010553 |
Strand | + |
Start bp | 80050 |
End bp | 80940 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641685353 |
Product | integrase catalytic region |
Protein accession | YP_001812258 |
Protein GI | 172064608 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGTACG CCTTCATCGA ACGCAATCGG TGTCACTGGC CGATTTCGGT GTTATGCGAA GTACTCGATG TGAGCCCCAG CGGCTTTCAT CAGCGGCGGC AACGTGTTGC GCAGAACAAG CCACACCGAG GCCACGTGAG CAACGACGCA CTGCTGGCGC ACATCAAGGC GGTTCACGCG GAGGTCAAGG GCGAATACGG CTGGCCGCGC ATGTGGAAAG AGCTGGTTTC GCGCGGCGTA CGCGTGGGCA AGGAGCGAGT TCGCAAGCTG ATGGCGCAGC ATGGTATCCG CGCACGGCAC AAGCGCAAGT ACATCGCAAC GACGAACTCG AACCACAACC TGCCGGTCGC GCCGAACCTG TTGGAGCAAA ACTTCACGAC GACAGCGCCG AATCACGTCT GGACTAGCGA CATCACGTAT GTGGCGACGG CCGAAGGCTG GCTGTATCTG GCCGTCATAA TCGACCTGTT CAGCCGGCAG GTGGTGGGCT GGTCGATGCA GCCGCATATG AAGGCCGAAC TGGTCACGGA CGCGCTGCGC ATGGCATGGT TCCGGCGCCG CCCCGAAGCC GGCGTGATTG TGCATAGCGA CCGTGGCAGC CAGTATTGCA GCGGACTCTT CCAGGACACG CTCAAGGCGT ACGCCATGCG TTCGTCGATG AGCCGGCGCG GCGATTGTTG GGATAATGCG CCGACCGAAA GCCTGTGGGG TTCGCTGAAG GTCGCACGAC TGCACGGTCG GCACTTCGCG ACGCGGCGTG CCGCGATGGA TGAAATCGTC GACTGGCTTG GTTTCTACAA TGCCCGTCGA CTGCATTCGA CACTGAACTA CGTCAGCCCC ATGAAGTTCG AGAAGAATTG GGCCGCCGCT CAGCGAGGGC AAGCGGCCTG A
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Protein sequence | MKYAFIERNR CHWPISVLCE VLDVSPSGFH QRRQRVAQNK PHRGHVSNDA LLAHIKAVHA EVKGEYGWPR MWKELVSRGV RVGKERVRKL MAQHGIRARH KRKYIATTNS NHNLPVAPNL LEQNFTTTAP NHVWTSDITY VATAEGWLYL AVIIDLFSRQ VVGWSMQPHM KAELVTDALR MAWFRRRPEA GVIVHSDRGS QYCSGLFQDT LKAYAMRSSM SRRGDCWDNA PTESLWGSLK VARLHGRHFA TRRAAMDEIV DWLGFYNARR LHSTLNYVSP MKFEKNWAAA QRGQAA
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