| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6569 |
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| Symbol | |
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| ID | 6181623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | - |
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| Start bp | 58950 |
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| End bp | 60209 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641685338 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_001812243 |
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| Protein GI | 172064593 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAC AGACCGACAC GTTGTCGCCG GAACAAGCCT CGCTCGTCAA GGGAAAGGTG
CCCCGTAACG CCCTGATCGC GGTGGGCAGC ATCGCTGCCA TCGCAATTGG TGCGATCGGC
TTCTACTACC AGACGCAGGA CAGTCGCAAG GCGGACGAAG AGGCGCTTCG GCTCAAGAAG
GAGCGCGCGG CGGAGGGCAT CGACAAGAGC AATCGTCCGG AAGACGTCGA CAAGATCATT
GCGGATCAGC AGGCCGCTGC GCGACGCGCG GCCTCCGAAG CGGCCGCGCG TGCCGCGTCC
GCGCCGGTCG CCGACAAGAA GCCGAATCTC TCGGCGGATT CGCTCGTTCC GGACCAAGGA
AACACGGACC TCAAGGCGAA AACGGCTGAG GACAATATCT ACGCGTCGCC AATTTTCAAG
GATGGCCTGA AAACGCCAGC CGCCAATGCC CAGCAGCAAC AGCAAGTGCC GAACGGTGTT
TTGACACCGC AGCAGATGCT GCAGCAAGCG GCCGCGCAAG AGGCAGCGAC GAACGCCGCG
ATCGCACAGG CTGCGGCCGC TGCCAAGGGC GGACAAGCGC CCGGCGCAAT GACGACGCAG
CAACGCGATA ACGAGTTCAT GCGCAACGTC GCCTTGCAAA GCGAGAACGG CCGAGATTTT
CCCCGTACGG GCTTCGTCGG CCAGTCGCGC GGTTGTACGT TGTCGCCGCC TGCCAAAATC
CCCGTGCTGT CGGCCGAGGC GCTCAACTCC GATCGTCCCG GCACGGCTTC GCTCGTCGTC
GAGCGCGACG TCTACGACAG CCTCACCAGC ACCTGCCTCG TGATCCCGTG GGGCACGACC
ATTACCGCGC CATACAGCTC GGACGTCCAA CCCGGTCAGG AGTCGATCCT TGTCGCCGGC
GCTGAAATGC GCCTGCCGAA CGGTAAGCAC GTGCCGCTTT ACGGCGCGCA GGGTGCTGAC
GGCAACGGGG CCGCCGGGTT CTCCGGGCAT GTCAACAACC ACTTCCTCAA GATCTACGGT
GCGTCGTTCC TGACCGCCAT CCTGCTACGT CGCTTCGACG GGGGCGATAG CTCCACGACC
ACCGGCCCGC TCGGCGTCAC CCAAGTCGGC AGTACGGCGG GGCAGGTCGC CGCGCAAACA
ACGCAATCCG TGCTGAGCCG CTACCAGAAC ATCCCGCCCA CCATCACCTC CGACCCGGGC
GAGCGCCACT TCATGCTCAA AGTCAACCGC GACATGGTCC TGGAGCCGTA CCGCCCATGA
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| Protein sequence | MAKQTDTLSP EQASLVKGKV PRNALIAVGS IAAIAIGAIG FYYQTQDSRK ADEEALRLKK
ERAAEGIDKS NRPEDVDKII ADQQAAARRA ASEAAARAAS APVADKKPNL SADSLVPDQG
NTDLKAKTAE DNIYASPIFK DGLKTPAANA QQQQQVPNGV LTPQQMLQQA AAQEAATNAA
IAQAAAAAKG GQAPGAMTTQ QRDNEFMRNV ALQSENGRDF PRTGFVGQSR GCTLSPPAKI
PVLSAEALNS DRPGTASLVV ERDVYDSLTS TCLVIPWGTT ITAPYSSDVQ PGQESILVAG
AEMRLPNGKH VPLYGAQGAD GNGAAGFSGH VNNHFLKIYG ASFLTAILLR RFDGGDSSTT
TGPLGVTQVG STAGQVAAQT TQSVLSRYQN IPPTITSDPG ERHFMLKVNR DMVLEPYRP
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