| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6564 |
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| Symbol | |
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| ID | 6181618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | - |
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| Start bp | 54293 |
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| End bp | 55903 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641685333 |
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| Product | type II secretory pathway component PulD-like protein |
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| Protein accession | YP_001812238 |
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| Protein GI | 172064588 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02520] type IVB pilus formation outer membrane protein, R64 PilN family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATGC ACCCATTGAA ATCCGCCGTG GCGATTGCTG CCGCCGTGCT GGCCACGGGC
TGTGCCGTGA CGCAGCAGGA CGTGAACGAC AGCTACGACG CCGCGCACCG CACGATTTCT
GACGCGCTGG CCAAGGGCCC GGAGTCGATG GCCCTCGTTG AAGACGTGCC GACCGCGTTC
CTCGGCGACC GGCTCGTGCC GCTTGCCTAC GAGGCCACGC TTCCGGCCGT GTTCCGCGAG
AAAAGCGTCA CGCTTCCGGC AAACCTCGGC ATCAGGCAGA TCGCGACGCT GATCTCGACG
GCAACGGGCT ATCCGGTTCA TCTGAGCCCG GATGTATTCG TCCCGCGCGA CTCGCTGGTG
CCTGGTCAGG GAGACGGAAA GGCCCAGACC CGCAATGTCG TCGCGAAGAC CGAAGAGCCG
GTCTATCGGC AGCCCTTCAC CGGCAAGGTC GGCCTGTACA TGCGCAATAT GAGCACCGAT
CTCGGCCTGG ACTGGTCGTT CGATGGCGGG TCAATCAACG TGTCCCGATT CGTGACGCGG
ATGTACCAGA TTGCCGCGAT CCCCGGCAAG GTCTCGATCA AGTCGACGAT GAGCAAAGGC
ATGGACACGT CGACCGGCAA TCAATCGGGT GGCAGCAGCG GCGGCAGTTC GGGCGGCAAT
ACCGGCTCGT TCTCCGCGCA GACGTCGACC GGTCGCGAGG GGGATTTCGA CCAGATTGCC
TCGATCACCG CCGAGATCGA CAAGCTGAAG TCGCCGATGG GCCGCGTCAG CGTGAACCCG
CAGAGTCGCC TCGTGATGGT GTACGACACG AAAGAGGCGG CGGACAACAT CGGCAAGTTG
TTGCAGCACG AGAACGCAAT CTCGACGCGT CAGGTCGCGG TCACGGTGCG CACGATCCAG
ATTTCGCTGA GCAAGGGCAG TGAGGCGGGC GCGAACGCGG ATGTTGTATT CAACGCGATG
CATGCAGGTC TCGCGCGCTA CGCGATCAGC TTCGCTTCGC CGACGTCGCT GGCAACGGGC
GGCGGCTCGG TCGGCGTCTC GGTGTTGCGC CCGGACGCCC CGTTCTCTGG CACGAACGCG
GCGATCAATG CGCTGAACAA GTACGGCCGC ACCGTGCAGG ACAACACGAT GACCAAGATG
ACGCTCAACG GGCTGCCGGT GTCGGTCGCC TCGTTCCAGA GCGACGACTA CCTGCGCTCG
ACGTCGCCGT CAGCCGGCAC GCTGAACGCG ACGTCGGGTG GTGTGCCTGG CTTGACGCCT
GGCACGATCA CCACGGGCGA CTTCGTCAAC GTGCTGCCGG CGGTCAATGA CCACAACCAG
ATCGTGCTCG CGTACTGGGC AGACAGCTCG AAGCTGAACG GCCCCTTCAC CAGCGCGGGG
GTAGGTTCGG GCCAGACACA GCAACAGATC CAGCTGGCGC ACACCATCGG CACCAAGGAC
GATCAGACGA TCGCGCTCTC TGATGGGCAG ACGGTTGTCC TGTACGGTGC GATGACGGAT
CACGCCGACA GCACGACGAA TGCGGGCATC GGTGGGCTCA CCGGGTCATG GAACAAGTCG
AAGACGTTCC AGATCATCAT GCTGAAGGCG ACGGTCGTTC CGTCGATGTG A
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| Protein sequence | MRMHPLKSAV AIAAAVLATG CAVTQQDVND SYDAAHRTIS DALAKGPESM ALVEDVPTAF
LGDRLVPLAY EATLPAVFRE KSVTLPANLG IRQIATLIST ATGYPVHLSP DVFVPRDSLV
PGQGDGKAQT RNVVAKTEEP VYRQPFTGKV GLYMRNMSTD LGLDWSFDGG SINVSRFVTR
MYQIAAIPGK VSIKSTMSKG MDTSTGNQSG GSSGGSSGGN TGSFSAQTST GREGDFDQIA
SITAEIDKLK SPMGRVSVNP QSRLVMVYDT KEAADNIGKL LQHENAISTR QVAVTVRTIQ
ISLSKGSEAG ANADVVFNAM HAGLARYAIS FASPTSLATG GGSVGVSVLR PDAPFSGTNA
AINALNKYGR TVQDNTMTKM TLNGLPVSVA SFQSDDYLRS TSPSAGTLNA TSGGVPGLTP
GTITTGDFVN VLPAVNDHNQ IVLAYWADSS KLNGPFTSAG VGSGQTQQQI QLAHTIGTKD
DQTIALSDGQ TVVLYGAMTD HADSTTNAGI GGLTGSWNKS KTFQIIMLKA TVVPSM
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