Gene BamMC406_6538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6538 
Symbol 
ID6181748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010553 
Strand
Start bp32337 
End bp33341 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content63% 
IMG OID641685307 
Producthypothetical protein 
Protein accessionYP_001812212 
Protein GI172064562 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.21958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAACCG CAGTCTTCGC CGTCGATGTC GGCTATGGCA ACACGAAATA CGCTCACCGC 
GCCGCAAGTG GAACGATCGC GACCGGCATG TTCCCGTCGC TGACTCCCCT CGCCGCAAGC
CGCACGCTAT CGGGCTACGG CGAGAGCGTA CTGACCGCGC GTAAGGTCTC GACGATCGTC
ATCGACCAGG TCGAATACGA AGTCGGGCCC GATGTGCCGC TTACCGCCGC CTACGGCAAT
ACCGGCCGAG CACTGGCAGA CGACTACGTG CTGTCCGACA ACTATGCCGC CCTCTTGTTT
GGCGCGATCC ACTTTTCTGG CGTCACGCAC ATTGAACGGT TGGTGCTCGG CCTGCCCGTC
CACAACATGA AAAAGTACTC GGCCGAGCTG AAGGAACGAT TTGCTGGGGA ACTGGATTTC
GGGGCTGGCC GGGTCACGGT CGACAAGGTC GTGGTGATCC CACAGCCGCT CGGCTCGCTG
GTACTCGCGT CGAGCAATCG CCAGCACGAG TTCGGGCGAG ACGTCGCCCA CCTCGTCGTC
GACGTCGGCT ACTTCACGAC CGACTGGGTG TATGCGAACG GCTTCACGAT GGATGACAAC
CGCAGCGGTG GCATGCCGGG CGGCGCATCG CAGATTTACC AGCGCATCGC CAGCCTCGTC
GCGCGCGACC AGGGTGACGA AGTCGAAGAC ATCGAACGTA TCGATAAGGC ATTGCGGGAG
CAGACGCCGT TCTTCTTCTA CGGAACCAAC ATTGATCTCG CGCCGTACCT CGAGCAGGCC
CAACCGCTGA TTTCGGGTGT CGTCAAGGAA ATGCAGAACA ACGTCGGCCG CTTGCCGAAC
GTTCGGTCGA TCATTCTTTC CGGCGGCGGC GCAGCGCTCT ACGCGGCGGT CATCCGACGC
GCGTTTCCGC GCGTGCTGAT TGAGGTGATC GACGCGCCGT GCCTCGCCAA CGTGCGCGGC
TTCCTGATGG TCGGGGAAGC CGGCCTTGCC CGCGAACGCC GCTAA
 
Protein sequence
MKTAVFAVDV GYGNTKYAHR AASGTIATGM FPSLTPLAAS RTLSGYGESV LTARKVSTIV 
IDQVEYEVGP DVPLTAAYGN TGRALADDYV LSDNYAALLF GAIHFSGVTH IERLVLGLPV
HNMKKYSAEL KERFAGELDF GAGRVTVDKV VVIPQPLGSL VLASSNRQHE FGRDVAHLVV
DVGYFTTDWV YANGFTMDDN RSGGMPGGAS QIYQRIASLV ARDQGDEVED IERIDKALRE
QTPFFFYGTN IDLAPYLEQA QPLISGVVKE MQNNVGRLPN VRSIILSGGG AALYAAVIRR
AFPRVLIEVI DAPCLANVRG FLMVGEAGLA RERR