Gene BamMC406_6537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6537 
Symbol 
ID6181747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010553 
Strand
Start bp30033 
End bp31175 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content63% 
IMG OID641685306 
ProductFis family transcriptional regulator 
Protein accessionYP_001812211 
Protein GI172064561 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.196102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCGA TCCTCAACGT TCGAGCAGTT GTGGGCCGCT ATCGACTGCC GCCGGAGTTT 
CGCGATGCAT TGCTGGTGCT TTTCGATCAG CACGTCGCGG AGATCCATAG CAGCACACGC
ATCAGCACCC GGGCGCTCTC AATCAGGACG CAGGAAAACC GCGCGGCTGC GCTCTGCAAG
GCGTTCGTAG AGCTGCGCGA AGGCGGCTTC GCATTGCAGA GCCCGTGGTC GCTGAAGGAA
AAACACGTGA AGTATCTCGT CACGCGGTGG GTTGACGCAG GGCAGTCGGG TGGTCGGATC
GAGAACAAGC TCACCTATCT GCGCGCGATC GCACTATGGA TGGGCAAGAC CAATCTGGTC
GGCACGCTCG GTGACTACGT GGACCGGCAA GCCGCGGGGC TGGTGCGCAG CTATGTGGCG
ACGGAGGACA AGTCGTGGGT GGCGCATGAT GTGGACGCTG CAGCGAAAAT CGACGAAATC
GCGTCGACCT GTCCGTACAC GGCGGTGCAA CTCAAGCTGC AGGCGGCATT CGGGTTGCGG
GTTGAGGAGA GTTTCATGCT GAGACCGCTC GAGGCTGTGC GCAATCCGCA GACGCTGGCC
GTGACGCGTG GCACGAAGGG TGGCCGCCCG CGTGAAGTGC CGATCGAGCG GAAGATCGCG
ATTCTGGAAG AGGCGGCTCG GCTCAGTAAC GGTTCATCGG GGTCGACGAT TCCGGCCGGC
CGCACGCTTA AGCAGTGGCG AGACTGGTAC TACTACGTGC TGAGTAAGCA TGGGGTGACG
AAGAGCGGGC TAGGGATTAC GAGCCACGGC TTGCGCCACG AATACCTGCA GACGCTATAC
GAGCAGGTCG CCGAGGTCCC GGCACCGATC AAGGGAGAGT CGGTGCGGCC CGATCGCGAG
GCACATGAAG AGGCAAAGCG CCGCGTCGTG GCCGCCGCCG GGCATAGCCG CGAATCGAAG
GCGAATGCCT ATCTGTCGAC GTTTGCGCGG CAAGAGGCAA TGCGCAAGCA ACTGCCGACC
ATTGATGCGG TCGAGGCCGC GTTGCGGGCC GCCGCCGGCA ACAAAAGTCA TGCAGCGGCA
GCGCTCGGGA TTTCGAGGCA AGCGCTCTAT CGGTTGCTCG CGTCGACTCA GGATCGGAAG
TGA
 
Protein sequence
MAAILNVRAV VGRYRLPPEF RDALLVLFDQ HVAEIHSSTR ISTRALSIRT QENRAAALCK 
AFVELREGGF ALQSPWSLKE KHVKYLVTRW VDAGQSGGRI ENKLTYLRAI ALWMGKTNLV
GTLGDYVDRQ AAGLVRSYVA TEDKSWVAHD VDAAAKIDEI ASTCPYTAVQ LKLQAAFGLR
VEESFMLRPL EAVRNPQTLA VTRGTKGGRP REVPIERKIA ILEEAARLSN GSSGSTIPAG
RTLKQWRDWY YYVLSKHGVT KSGLGITSHG LRHEYLQTLY EQVAEVPAPI KGESVRPDRE
AHEEAKRRVV AAAGHSRESK ANAYLSTFAR QEAMRKQLPT IDAVEAALRA AAGNKSHAAA
ALGISRQALY RLLASTQDRK