| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6534 |
|---|
| Symbol | |
|---|
| ID | 6181780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010553 |
|---|
| Strand | - |
|---|
| Start bp | 27990 |
|---|
| End bp | 28442 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641685303 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001812208 |
|---|
| Protein GI | 172064558 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.168837 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGC CGAAGTCCGC GATTCGATCC AAGTCGGATC TGTTGCCAAT CCCTGCCGCG
GATCGTGACG GGATCGTGCT CGAGTGCTAT CTCGCGCTGA GCACGCTGCA GGCCGGTCAG
GGCGATCGCC ATACGCTGGC TGTGCTGACC CATGCGCTTG TCGCGACGCA CTTTCTGTTG
GAGGCGGGGG TGGGCGGCGG AAGCAAGAGT CGGGCGACGT TTGCGGCAGC GCAGGATGCG
ATCAACGAAA TCGACTCGGG TGCGGTAATC GCTGGACGAT GTGCGGTGAC AACGGAATCC
TCGGCAGCCG CGATCGGCGG GTTGCTGGCG CTCTACGATC GGCAACTGGG ACGCGCGCCG
CGCGCGACGG TGGCCAGGAT CGTCGCGCAA GCGAATGCAT TTTGGCGCGG ATCGTCCGGG
GCGCCGAGCG AGCAGGAGCG GCTTGCGGCC TAG
|
|---|
| Protein sequence | MKPPKSAIRS KSDLLPIPAA DRDGIVLECY LALSTLQAGQ GDRHTLAVLT HALVATHFLL
EAGVGGGSKS RATFAAAQDA INEIDSGAVI AGRCAVTTES SAAAIGGLLA LYDRQLGRAP
RATVARIVAQ ANAFWRGSSG APSEQERLAA
|
|---|
| |