| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6509 |
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| Symbol | |
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| ID | 6181545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | - |
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| Start bp | 8163 |
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| End bp | 9293 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641685278 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001812183 |
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| Protein GI | 172064533 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAA TTGCCCAGAA TCCGCCAACC GCGCATCAGC CGAGCGTCGA ACGTCCGGTG
GCTGATGTGC CGGCATCCCG CCCGCGCGCG CAGATCACTG CGGAAGAGCT GCTCAAGGTC
CGTCCGCTCG AAGACAACGC GGTGAAGCTG TTCTTCGCGT CGCTCGACCA GCTAACCGGT
CCGCTGGATG CACCCGACGT TGCCGAAATC ATGATCAACG ACTACGACAA CGTCTGGATC
GAGCGGCGAG GTGCGATGCA CAAGCTGGAC CTGCGCTTCA ATCCCGCGAA GCTGCAGGGC
GCCATTCTGT CGCTCGCGTC GTCGGTCGAA AAGTCCGCGA AAGCCGGTAC TGCGCAGGGC
ATCATCAACG GCGGCCACAA GAATCTCCGG ATCGCTTCCG TGATGCGCCC GACCGCGATC
GACGGGCATG CGCTTGCGAT CCGGAAGCAT CGGGAATCGA ACCTGTCGTT GTCCGACTAC
GTCGGCATGG GCGCGTTCTC GCTCGTCCAC GCTCGCCGCG AGGTCGAGCG CGCGATCTTT
CCGCCGGGGG CGCATGACGA GGTCCTGGGA GAAGCATTCC GGGTGCTGGT TCGATCCCGA
GCGAACGTCC TGGTGGCAGG CGGCACGTCG ACTGGCAAGA CGACGTTTCT GAACGCGCTG
AATGCGGAGA TCCCGCCAGA GGAGCGTGTC ATCACGATCG AAGACACGAT GGAACTCAAG
CTGTTCGCGC CGAATCGCGT GCGGCTGCTG TCGAACCCCG ACAAGGGCGT GACCACGCAG
GTCCTCGTCG CGCTATGTCT GCGCTTCCGG CCCGACCGAA TCATCGTCGG TGAGGTTCGG
GGCGGCGAAG CCTACGACTT CATTCAGGCA TTGAGCACCG GCCACGACGG TGGCATGGGC
TCGATCCACT CGAACGACGC GCGGGGCGCA CTGAGTCGTC TCGAGAGTCT GGCGATGCTC
GGCATCCCCA CGGGGAGCCG CTGGGAGCTT GCCGACATGC GCAAGGCTAT CGCGGATTGT
TTTCACTACG TCGTGCACCT GCGTCGCACG GGCGAGCTGC GCCACGTGTC GGAAGTGCTC
GCCATCAAGG GTTTCAAAAA CGGGGACTAC GTCCTCGAGC GCGTTTTCTA A
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| Protein sequence | MSEIAQNPPT AHQPSVERPV ADVPASRPRA QITAEELLKV RPLEDNAVKL FFASLDQLTG
PLDAPDVAEI MINDYDNVWI ERRGAMHKLD LRFNPAKLQG AILSLASSVE KSAKAGTAQG
IINGGHKNLR IASVMRPTAI DGHALAIRKH RESNLSLSDY VGMGAFSLVH ARREVERAIF
PPGAHDEVLG EAFRVLVRSR ANVLVAGGTS TGKTTFLNAL NAEIPPEERV ITIEDTMELK
LFAPNRVRLL SNPDKGVTTQ VLVALCLRFR PDRIIVGEVR GGEAYDFIQA LSTGHDGGMG
SIHSNDARGA LSRLESLAML GIPTGSRWEL ADMRKAIADC FHYVVHLRRT GELRHVSEVL
AIKGFKNGDY VLERVF
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