| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6506 |
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| Symbol | |
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| ID | 6181542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | - |
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| Start bp | 4991 |
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| End bp | 7468 |
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| Gene Length | 2478 bp |
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| Protein Length | 825 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641685275 |
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| Product | type IV secretory pathway VirB4 components-like protein |
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| Protein accession | YP_001812180 |
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| Protein GI | 172064530 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAGTT CGAAAATCAA GCGCGGCCCG ATGCAGGAGA TCGCGCCGTG GGCGACGATG
GTCACCCCTG AGCTTGTCCT GGACAAGGAT GGGTCGCTGC TGACGGTGTT CACGTTCGAC
GGAATCGACG CCGACTCGCC GAACAAGGCG GATATTTCGG CAGCGCGAGA CAACCTCGAT
CATGCGTGCA AGAACTTCGA CCACCGGGTA ACGGCGTGGT GGCGACTGTC GCATCGGCGT
GTCCGTGGGG ACATACAGGG GGGATTCTCG TCCCGGATCG ACGAGCGCAT CGATGCCATC
AACCGCGCAC ACGTCAGCAG CGGCAAGTTT TTCCGCAACA CCCATTCGCT GGCGCTGGCT
TACACGCCCG AGACCGGGAT CAACAAGATC TTCGAGAAGG TCGCGTACCA CATGACGGTC
GGCGGCAAGT CGGTGCCGGT CGCTCTGTGG GAAACCCTCC GGGACGTGCT TTTTGCACGC
AGCGCTTTCG CGTTCGACAT GGAGCGGATT ACGTCGGACA TCAAGCGGTT CGAGGGGGTT
ATCGACGCTT TCAAGGGCGG CGTGACGCGC CTCAAGATGA AGCGCCTGCA ACTGCAGAAC
GTCATGGCGT TCCTGCACCA GACCGCGAAC CCCTCCGTTC CGCCGCGCCG CGTTCGCTAC
CCGGTCACGA TGCTGGACAC CCATTTGACC GAGACGTTCG TGACGTACGG CACGGAGCAC
CTGATGTTCG AGTCAGCGTA CGGAAAGCGG TACGCGAAGA TCGTGTCCGT GAAGGAATGG
ATGGGGTTTC AGGAGGCCGC CCTCGATGTC CTGGCGGACG TCGACGCCGA GCTCGACATC
TGCGTCATGT TCCGCTTCCT GTCGAGCCAC AAGGCGCGGG TCTATATCGA GAAGATGCGC
AAGTTCTACA AGGTCGCGGC GTTCAACCCG CTTGCGATCC TGAAGAGCTT CTTCTCGAAG
GATGAAAAGC AGGAGGCGGA AAAGAACGAC AAGGGGCGTG AAATCCTTGC CGAAGAGGCT
GAAAATGCAC TGGCGAAACT GGTGGCCGAT GGGACGCAGT ATGGGTTCGC CAACATCTCG
GTGGTCGTCT ATGGAGACAC GGTCGAGGAG TGCGACGACA ACACGCGCGA AGTCGTCGGC
CGCATCGGCA ATGCGGGGTT TGGCGTCATC CTGGAGACCC GCAACATCCC GGCGGCGTGG
GCGACCACGT TGCCCGGACG GTGGGATCAG CAAAAACGCC TGCAGTTCGT CGAAACGCCG
TGCGTTTCCG ACATTGCGCC GTTGCGCGGG GTCGAGGAAG GCAGTCCGAT CAACCAGTGG
TTGACCCAAC AGACCGGCGA GCAGACTGGG CCGCTTACCG TTCTGCCCAC CCGTCACCGA
ACGCTGCAGC GCGTGACGCT GCACCAACCG GGCGGCAAGT CGCACACGCT CGTGGTCGGG
CCGATCGGGG CGGGCAAGAC GATCTTCCTG AACTTTCTCG TGTCGCAGTC CGGGCGCCAC
AACCCGCGCC GGATCAAGTT CGACAAGAAC CGGTCGACAC GGATTCCGAC GGTGATGGCC
AACGGTCGCT TTGTCGATGC GACTGGGCGG TTCGGCGCGG CCACGCCGGT CAACCCGCTT
TCGCTGCTGG CGGATAAGCG GCACTGGACC TACGTGGCGG AATGGGTGCA GATGGCGATC
GAGGATGAGG ACTTCCACTG CACGCCGCAG CAGCAGACGG ATATCTATCA GGCTGTCGCA
ACGCTCGGCG GCGGCGAGTA CGACCGCGAA CTCTGGACGC TGTCGATGCT GAACACGCTG
TTGCCAATGG AGCTGCGCGA GCGCCTCCAG ATCTGGACGC AAGGTGAGAA GAACGGTCGC
TTCTTTGATC ACGTCGAGGA TGCGTTCTCG CTGTCGGACG ATATCGCGAT CGAGATGGGC
GACCTGTTCG AGAAATACCC GGTCGCCGCC GCGCTATTCA TGGACTACGC GTTCTATCGC
ATCTCGCAAT GGCTGGACGG GAAGCGCTTC ACGATCATCG AAGTCGAAGA GTGTGGGTTC
TTCTTCCAGT ATGAACGCTT CTATGCCCGC CTGGAACTGT GGGCCGTCAC GATCCGCGGC
TTGAACGGGA CGCTCGTGAT GGCGACCCAA TCGCTCGGGC AGCTCGCCCG CGTGAAGAAC
TTCGAGATTC TCAAGGAGAA CATCCCGAAC TTCTTCTTCC TGCCGAACCG GGACGCACGC
AACAACAAGC ACCTGTATCG GGATGTGTTC GGCCTGACCG ACGACCTGAT CGACATGATT
GCCGACGCGG TGCCCAACCG CGATTACCTG TGGGTGACCC CTGACCACGC ACGGATGCTC
CAGGCGCAAT TCCCGAAAGA AGCTCTCGCC GTGTTGCGCG CCGACGGCGC GGCCCAACGG
GTGCTCGACA AACACCACGA CTCCGGCTCG CCGCACTGGC GTGAAGAGTA CCTCCAAGAA
ATGATGACTC TCGACTGA
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| Protein sequence | MLSSKIKRGP MQEIAPWATM VTPELVLDKD GSLLTVFTFD GIDADSPNKA DISAARDNLD
HACKNFDHRV TAWWRLSHRR VRGDIQGGFS SRIDERIDAI NRAHVSSGKF FRNTHSLALA
YTPETGINKI FEKVAYHMTV GGKSVPVALW ETLRDVLFAR SAFAFDMERI TSDIKRFEGV
IDAFKGGVTR LKMKRLQLQN VMAFLHQTAN PSVPPRRVRY PVTMLDTHLT ETFVTYGTEH
LMFESAYGKR YAKIVSVKEW MGFQEAALDV LADVDAELDI CVMFRFLSSH KARVYIEKMR
KFYKVAAFNP LAILKSFFSK DEKQEAEKND KGREILAEEA ENALAKLVAD GTQYGFANIS
VVVYGDTVEE CDDNTREVVG RIGNAGFGVI LETRNIPAAW ATTLPGRWDQ QKRLQFVETP
CVSDIAPLRG VEEGSPINQW LTQQTGEQTG PLTVLPTRHR TLQRVTLHQP GGKSHTLVVG
PIGAGKTIFL NFLVSQSGRH NPRRIKFDKN RSTRIPTVMA NGRFVDATGR FGAATPVNPL
SLLADKRHWT YVAEWVQMAI EDEDFHCTPQ QQTDIYQAVA TLGGGEYDRE LWTLSMLNTL
LPMELRERLQ IWTQGEKNGR FFDHVEDAFS LSDDIAIEMG DLFEKYPVAA ALFMDYAFYR
ISQWLDGKRF TIIEVEECGF FFQYERFYAR LELWAVTIRG LNGTLVMATQ SLGQLARVKN
FEILKENIPN FFFLPNRDAR NNKHLYRDVF GLTDDLIDMI ADAVPNRDYL WVTPDHARML
QAQFPKEALA VLRADGAAQR VLDKHHDSGS PHWREEYLQE MMTLD
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